# HG changeset patch # User luca_milaz # Date 1731950008 0 # Node ID 0a043d85070eec50badda1b19dc75a6832aac76e # Parent b5a26d1c4fdcf55ba7f77e37a6311e298be14a19 Uploaded diff -r b5a26d1c4fdc -r 0a043d85070e COBRAxy/flux_to_map.xml --- a/COBRAxy/flux_to_map.xml Tue Nov 12 17:14:08 2024 +0000 +++ b/COBRAxy/flux_to_map.xml Mon Nov 18 17:13:28 2024 +0000 @@ -156,8 +156,8 @@ The tool generates: - 1) a tab-separated file: reporting fold-change and p-values of fluxes between a pair of conditions/classes; - 2) a metabolic map file (downloadable as .svg and .png): visualizing up- and down-regulated reactions between a pair of conditions/classes; - - 3) two metabolic maps to visualize the mean and median fluxes normalized amongst all classes. The associated color map with values bounds is also generated. - - 3) a log file (.txt). + - 3) two metabolic maps to visualize the mean and median fluxes normalized amongst all classes. The associated color map is also generated. + - 4) a log file (.txt). Output options: To calculate P-Values and Fold-Changes and to enrich maps, comparisons are performed for each possible pair of groups (default option ‘One vs One’).