# HG changeset patch
# User francesco_lapi
# Date 1759833093 0
# Node ID 0cb727788cae0b6ccd019d8196e71f45fff4fbbc
# Parent  c17c6c9d112c04b0a291059ac9a764823ef4022b
Uploaded

diff -r c17c6c9d112c -r 0cb727788cae COBRAxy/flux_simulation.xml
--- a/COBRAxy/flux_simulation.xml	Tue Oct 07 09:48:18 2025 +0000
+++ b/COBRAxy/flux_simulation.xml	Tue Oct 07 10:31:33 2025 +0000
@@ -22,18 +22,18 @@
         #if $model_and_bounds.model_and_bounds == 'True':
             --model_upload $model_and_bounds.model_upload
             --input "${",".join(map(str, $model_and_bounds.inputs))}"
-            #set $names = ""
+            #set $names_list = []
             #for $input_temp in $model_and_bounds.inputs:
-                #set $names = $names + $input_temp.element_identifier + ","
+                #silent $names_list.append(str($input_temp.element_identifier))
             #end for
-            --name $names
+            --name "${",".join($names_list)}"
         #else:
             --input "${",".join(map(str, $model_and_bounds.model_files))}"
-            #set $names = ""
+            #set $names_list = []
             #for $input_temp in $model_and_bounds.model_files:
-                #set $names = $names + $input_temp.element_identifier + ","
+                #silent $names_list.append(str($input_temp.element_identifier))
             #end for
-            --name $names
+            --name "${",".join($names_list)}"
         #end if
         
         --sampling_enabled $sampling_params.sampling_enabled