# HG changeset patch
# User luca_milaz
# Date 1728830139 0
# Node ID 22cebbdb4b6d2c2025e11ad3f57756d771bb17a6
# Parent  58919e82d96e9226181c389a93364c1485ee92f9
Uploaded

diff -r 58919e82d96e -r 22cebbdb4b6d COBRAxy/ras_to_bounds.py
--- a/COBRAxy/ras_to_bounds.py	Sun Oct 13 14:06:53 2024 +0000
+++ b/COBRAxy/ras_to_bounds.py	Sun Oct 13 14:35:39 2024 +0000
@@ -175,14 +175,6 @@
     rxns_ids = [rxn.id for rxn in model.reactions]
     
     # Set medium conditions
-    ''' 
-    reactions_medium=model2.medium.keys()
-        for reaction in reactions_medium:
-            if(reaction != "EX_thbpt_e" and reaction != "EX_lac__L_e"):
-                model2.reactions.get_by_id(reaction).lower_bound=-float(ras_meta.loc[cell,"countmatrix_"+reaction])
-            if(reaction == "EX_lac__L_e"):
-                model2.reactions.get_by_id(reaction).lower_bound=float(0.0)
-    '''
     for reaction, value in medium.items():
         if value is not None:
             if(reaction != "EX_thbpt_e" and reaction != "EX_lac__L_e"):