# HG changeset patch
# User francesco_lapi
# Date 1750254151 0
# Node ID 3f8336f8072d639aba24034b652965909258346a
# Parent  f62b8625f6f18a69076247ce21e05dcd5fb6f544
Uploaded

diff -r f62b8625f6f1 -r 3f8336f8072d COBRAxy/flux_to_map.py
--- a/COBRAxy/flux_to_map.py	Wed Jun 18 13:42:05 2025 +0000
+++ b/COBRAxy/flux_to_map.py	Wed Jun 18 13:42:31 2025 +0000
@@ -733,13 +733,21 @@
             comparisonDict, max_z_score = compareDatasetPair(class_pat.get(single_cluster), rest, ids)
             enrichment_results.append((single_cluster, "rest", comparisonDict, max_z_score))
     
+    #elif ARGS.comparison == "onevsmany":
+    #    controlItems = class_pat.get(ARGS.control)
+    #    for otherDataset in class_pat.keys():
+    #        if otherDataset == ARGS.control:
+    #            continue
+    #        comparisonDict, max_z_score = compareDatasetPair(controlItems, class_pat.get(otherDataset), ids)
+    #        enrichment_results.append((ARGS.control, otherDataset, comparisonDict, max_z_score))
     elif ARGS.comparison == "onevsmany":
         controlItems = class_pat.get(ARGS.control)
         for otherDataset in class_pat.keys():
             if otherDataset == ARGS.control:
                 continue
-            comparisonDict, max_z_score = compareDatasetPair(controlItems, class_pat.get(otherDataset), ids)
-            enrichment_results.append((ARGS.control, otherDataset, comparisonDict, max_z_score))
+            comparisonDict, max_z_score = compareDatasetPair(class_pat.get(otherDataset),controlItems, ids)
+            enrichment_results.append(( otherDataset,ARGS.control, comparisonDict, max_z_score))
+
     return enrichment_results
 
 def createOutputMaps(dataset1Name :str, dataset2Name :str, core_map :ET.ElementTree) -> None: