# HG changeset patch
# User luca_milaz
# Date 1728837128 0
# Node ID 6e1a6e4809697b067d3e7985fd28509c0a2002c3
# Parent  69190617d1eac2aa2ce1c748024f4eb2190f0011
Uploaded

diff -r 69190617d1ea -r 6e1a6e480969 COBRAxy/ras_to_bounds.py
--- a/COBRAxy/ras_to_bounds.py	Sun Oct 13 16:27:27 2024 +0000
+++ b/COBRAxy/ras_to_bounds.py	Sun Oct 13 16:32:08 2024 +0000
@@ -178,9 +178,6 @@
         pd.DataFrame: DataFrame containing the bounds of reactions in the model.
     """
     rxns_ids = [rxn.id for rxn in model.reactions]
-
-    warning(str(model.reactions.get_by_id("EX_Lcystin_e").lower_bound))
-    warning(str(model.reactions.get_by_id("EX_Lcystin_e").upper_bound))
     
     # Set medium conditions
     for reaction, value in medium.items():
@@ -200,6 +197,9 @@
         model.reactions.get_by_id(reaction).lower_bound = float(df_FVA.loc[reaction, "minimum"])
         model.reactions.get_by_id(reaction).upper_bound = float(df_FVA.loc[reaction, "maximum"])
 
+    warning(str(model.reactions.get_by_id("EX_Lcystin_e").lower_bound))
+    warning(str(model.reactions.get_by_id("EX_Lcystin_e").upper_bound))
+
     if ras is not None:
         #Parallel(n_jobs=cpu_count())(delayed(process_ras_cell)(cellName, ras_row, model, rxns_ids, output_folder) for cellName, ras_row in ras.iterrows())
         for cellName, ras_row in ras.iterrows():