# HG changeset patch # User luca_milaz # Date 1728836262 0 # Node ID 734cc52537daa485444b639c1069b9425d18b0d1 # Parent 867a965d6a57173878ba7788ba580c080d22eea1 Uploaded diff -r 867a965d6a57 -r 734cc52537da COBRAxy/ras_to_bounds.py --- a/COBRAxy/ras_to_bounds.py Sun Oct 13 16:15:50 2024 +0000 +++ b/COBRAxy/ras_to_bounds.py Sun Oct 13 16:17:42 2024 +0000 @@ -124,6 +124,7 @@ None """ warning(str(model.reactions.get_by_id("EX_Lcystin_e").lower_bound)) + warning(str(model.reactions.get_by_id("EX_Lcystin_e").upper_bound)) for reaction in rxns_ids: if reaction in ras_row.index: #and reaction not in mediumRxns_ids scaling_factor = ras_row[reaction] @@ -139,6 +140,7 @@ model.reactions.get_by_id(reaction).lower_bound=valMin model.reactions.get_by_id(reaction).upper_bound=valMax warning(str(model.reactions.get_by_id("EX_Lcystin_e").lower_bound)) + warning(str(model.reactions.get_by_id("EX_Lcystin_e").upper_bound)) pass def process_ras_cell(cellName, ras_row, model, rxns_ids, mediumRxns_ids, output_folder):