# HG changeset patch
# User francesco_lapi
# Date 1732616237 0
# Node ID 8b9f263f924ef5d42b5f4894aa8dfd33d0fb6d57
# Parent fe58dddc96c8164c61221ef55b9e7d496d9b40fb
Uploaded
diff -r fe58dddc96c8 -r 8b9f263f924e COBRAxy/local/svg metabolic maps/ENGRO2_map.svg
--- a/COBRAxy/local/svg metabolic maps/ENGRO2_map.svg Mon Nov 25 11:21:35 2024 +0000
+++ b/COBRAxy/local/svg metabolic maps/ENGRO2_map.svg Tue Nov 26 10:17:17 2024 +0000
@@ -30,16 +30,32 @@
inkscape:pageopacity="0.0"
inkscape:pagecheckerboard="0"
inkscape:deskcolor="#d1d1d1"
- showgrid="false"
- inkscape:zoom="1.9442505"
- inkscape:cx="1002.1857"
- inkscape:cy="2208.306"
+ showgrid="true"
+ inkscape:zoom="0.68739635"
+ inkscape:cx="1593.6948"
+ inkscape:cy="972.51026"
inkscape:window-width="1920"
inkscape:window-height="1017"
inkscape:window-x="-8"
inkscape:window-y="-8"
inkscape:window-maximized="1"
- inkscape:current-layer="ENGRO2_2" />
+ inkscape:current-layer="ENGRO2_2"
+ showguides="true">
+
+
Tyr
+ id="tspan194"
+ style="fill:#000000">Tyr
Pro
+ id="tspan210"
+ style="fill:#000000">Pro
Ser
+ id="tspan170"
+ style="fill:#000000">Ser
Glu
+ id="tspan157"
+ style="fill:#000000">Glu
Gln
+ id="tspan218"
+ style="fill:#000000">Gln
Gly
+ id="tspan173"
+ style="fill:#000000">Gly
Cys
+ id="tspan202"
+ style="fill:#000000">Cys
Asp
+ id="tspan134"
+ style="fill:#000000">Asp
Asn
+ id="tspan181"
+ style="fill:#000000">Asn
Ala
+ id="tspan131"
+ style="fill:#000000">Ala
Arg
+ id="tspan148"
+ style="fill:#000000">Arg
+ style="stroke-width:2.3;stroke:#000000;stroke-opacity:1;stroke-dasharray:none" />
CySS
+ style="stroke-width:0.997137;fill:#000000">CySS
Ala
+ style="stroke-width:0.997137;fill:#000000">Ala
CySS
+ style="stroke-width:0.997137;fill:#000000">CySS
Ala
+ style="stroke-width:0.997137;fill:#000000">Ala
+ style="fill:none;stroke-width:2.30660334;stroke-dasharray:none;stroke:#000000;stroke-opacity:1" />
+ style="fill:none;stroke-width:2.3;stroke:#000000;stroke-opacity:1;stroke-dasharray:none" />
+ style="fill:none;stroke-width:2.30660334;stroke-dasharray:none;stroke:#000000;stroke-opacity:1" />
+ stroke-width="2.23952"
+ style="fill:none" />
+ stroke-width="2.23952"
+ style="fill:none" />
+ stroke-width="2.23952"
+ style="fill:none" />
+ stroke-width="2.23952"
+ style="fill:none" />
+ stroke-width="2.23952"
+ style="fill:none" />
+ stroke-width="2.23952"
+ style="fill:none" />
@@ -2093,7 +2124,8 @@
d="m 429.5,2074.5 c 9.36,-1.83 9.36,-1.83 9.36,-1.83 L 432,2069.5 Z m -12.291,0 c 2.791,9.76 2.791,9.76 2.791,9.76 l 2.961,-9.71 -2.897,2.41 z"
fill="#2b0000"
stroke="#000000"
- stroke-width="2.23952" />
+ stroke-width="2.23952"
+ style="fill:none" />
+ stroke-width="2.23952"
+ style="fill:none" />
+ stroke-width="2.23952"
+ style="fill:none" />
+ stroke-width="2.23952"
+ style="fill:none" />
+ stroke-width="2.23952"
+ style="fill:none" />
+ stroke-width="2.23952"
+ style="fill:none" />
Glutathione synthesis
@@ -3240,10 +3277,11 @@
fill-opacity="0.1" />
+ stroke-linecap="round"
+ sodipodi:nodetypes="cssssssssc" />
Biomass
@@ -3269,103 +3307,112 @@
id="text5640-6"
fill="#2b0000"
xml:space="preserve"
- style="white-space:pre"
+ style="white-space:pre;fill:#000000"
font-family="Inter"
font-size="16.1333px"
letter-spacing="0em">0.01 dTTP
+ id="tspan4670"
+ style="fill:#000000">0.01 dTTP
0.01 dATP
+ id="tspan4673"
+ style="fill:#000000">0.01 dATP
0.01 dGTP
+ id="tspan4676"
+ style="fill:#000000">0.01 dGTP
0.05 UTP
+ id="tspan4679"
+ style="fill:#000000">0.05 UTP
0.01 dCTP
+ id="tspan4682"
+ style="fill:#000000">0.01 dCTP
0.04CTP
+ id="tspan4685"
+ style="fill:#000000">0.04CTP
0.27 Palm
+ id="tspan4688"
+ style="fill:#000000">0.27 Palm
0.20 Chol
+ id="tspan4691"
+ style="fill:#000000">0.20 Chol
0.28 G6P
+ id="tspan4694"
+ style="fill:#000000">0.28 G6P
@@ -3373,256 +3420,279 @@
id="text6883-6-8"
fill="#2b0000"
xml:space="preserve"
- style="white-space:pre"
+ style="white-space:pre;fill:#000000"
font-family="Inter"
font-size="16px"
letter-spacing="0em">20.65 H20
+ id="tspan4698"
+ style="fill:#000000">20.65 H20
20.70 ATP
+ id="tspan4701"
+ style="fill:#000000">20.70 ATP
0.04 GTP
+ id="tspan4705"
+ style="fill:#000000">0.04 GTP
0.36 Arg
+ id="tspan4708"
+ style="fill:#000000">0.36 Arg
0.05 Cys
+ id="tspan4711"
+ style="fill:#000000">0.05 Cys
0.39 Glu
+ id="tspan4714"
+ style="fill:#000000">0.39 Glu
0.35 Asp
+ id="tspan4717"
+ style="fill:#000000">0.35 Asp
0.33 Gln
+ id="tspan4720"
+ style="fill:#000000">0.33 Gln
0.28 Asn
+ id="tspan4723"
+ style="fill:#000000">0.28 Asn
0.29 Ile
+ id="tspan4726"
+ style="fill:#000000">0.29 Ile
0.12 His
+ id="tspan4729"
+ style="fill:#000000">0.12 His
0.54 Gly
+ id="tspan4732"
+ style="fill:#000000">0.54 Gly
0.59Lys
+ id="tspan4735"
+ style="fill:#000000">0.59Lys
0.41 Pro
+ id="tspan4738"
+ style="fill:#000000">0.41 Pro
0.26 Phe
+ id="tspan4741"
+ style="fill:#000000">0.26 Phe
0.15 Met
+ id="tspan4744"
+ style="fill:#000000">0.15 Met
0.55 Leu
+ id="tspan4747"
+ style="fill:#000000">0.55 Leu
0.01 Trp
+ id="tspan4750"
+ style="fill:#000000">0.01 Trp
0.31Thr
+ id="tspan4753"
+ style="fill:#000000">0.31Thr
0.16 Tyr
+ id="tspan4756"
+ style="fill:#000000">0.16 Tyr
0.35Val
+ id="tspan4759"
+ style="fill:#000000">0.35Val
0.39 Ser
+ id="tspan4762"
+ style="fill:#000000">0.39 Ser
0.51 Ala
+ id="tspan4765"
+ style="fill:#000000">0.51 Ala
20.65 H
- 20.65 H
+
+ stroke-linecap="round"
+ sodipodi:nodetypes="cssssssssc" />
Fatty acids / Cholesterol synthesis
@@ -4775,10 +4847,11 @@
fill-opacity="0.1" />
+ stroke-linecap="round"
+ sodipodi:nodetypes="cssssssssc" />
Ammonia detox
@@ -5166,10 +5239,11 @@
inkscape:label="box_mitochondria_space">
+ stroke-linecap="round"
+ sodipodi:nodetypes="cssssssssc" />
Mitochondrial space
@@ -10896,10 +10970,11 @@
fill-opacity="0.1" />
+ stroke-linecap="round"
+ sodipodi:nodetypes="cssssssssc" />
Urea cycle
@@ -11138,10 +11213,11 @@
fill-opacity="0.1" />
+ stroke-linecap="round"
+ sodipodi:nodetypes="cssssssssc" />
Fatty acids β-oxidation
@@ -11462,7 +11538,7 @@
fill-opacity="0.1" />
Amino acids synthesis / degradation
@@ -13689,10 +13765,11 @@
y="643.15997"
id="tspan5653">AKG
+ stroke-width="2.66667"
+ inkscape:label="B_LEUTA" />
@@ -14189,10 +14266,11 @@
fill-opacity="0.1" />
+ stroke-linecap="round"
+ sodipodi:nodetypes="cssssssssc" />
Nucleotide synthesis
@@ -15062,26 +15140,28 @@
id="text7967-0-3-6-2"
fill="#2b0000"
xml:space="preserve"
- style="white-space:pre"
+ style="white-space:pre;fill:#000000"
font-family="Arial"
font-size="16px"
font-weight="bold"
letter-spacing="0em">GDP
+ id="tspan1969"
+ style="fill:#000000">GDP
dGDP
+ id="tspan1972"
+ style="fill:#000000">dGDP
ADP
+ id="tspan2083"
+ style="fill:#000000">ADP
-
NAD
+ id="tspan2130"
+ style="fill:#000000">NAD
⁺
+ id="tspan2134"
+ style="fill:#000000">⁺
HHO
+ id="tspan2141"
+ style="fill:#000000">O
₂
+ id="tspan2145"
+ style="fill:#000000">₂
ATP
+ id="tspan2150"
+ style="fill:#000000">ATP
NH
+ id="tspan2153"
+ style="fill:#000000">NH
₃
+ id="tspan2157"
+ style="fill:#000000">₃
NADH
+ id="tspan2162"
+ style="fill:#000000">NADH
H
+ id="tspan2165"
+ style="fill:#000000">H
⁺
+ id="tspan2169"
+ style="fill:#000000">⁺
AMP
+ id="tspan2174"
+ style="fill:#000000">AMP
PPi
+ id="tspan2177"
+ style="fill:#000000">PPi
NADP
+ id="tspan2181"
+ style="fill:#000000">NADP
⁺
+ id="tspan2185"
+ style="fill:#000000">⁺
NH
+ id="tspan2190"
+ style="fill:#000000">NH
₃
+ id="tspan2194"
+ style="fill:#000000">₃
H
+ id="tspan2199"
+ style="fill:#000000">H
⁺
+ id="tspan2203"
+ style="fill:#000000">⁺
NADPH
+ id="tspan2208"
+ style="fill:#000000">NADPH
ATP
+ id="tspan2219"
+ style="fill:#000000">ATP
+ stroke-width="1.95125"
+ style="fill:none" />
+ stroke-width="1.95125"
+ style="fill:none" />
+ stroke-width="1.95125"
+ style="fill:none" />
+ stroke-width="1.95125"
+ style="fill:none" />
+ stroke-linecap="round"
+ sodipodi:nodetypes="cssssssssc" />
Pentose Phosphate pathway
@@ -16735,10 +16841,11 @@
fill-opacity="0.1" />
+ stroke-linecap="round"
+ sodipodi:nodetypes="cssssssssc" />
Glycolysis / Gluconeogenesis
PPi
+ AMP
+ CoA
-
+
+ d="m 1453.9164,856.93616 c 0.3662,-13.86218 28.749,-12.01673 28.749,-12.01673 m -81.8209,12.4836 c -1.4152,-19.40601 14.9383,-12.3979 16.0554,-14.73999 m -145.2667,13.58249 187.5951,1.18738 24.4791,-0.23684 c 11.5406,-0.11549 9.1922,21.1558 9.1922,21.1558 M 1358.7608,857.0927 c -33.6147,1.60593 -31.9892,10.79254 -31.9892,10.79254 m -16.8753,-11.23828 c -23.5105,-0.38608 -28.7325,10.9471 -28.7325,10.9471"
+ inkscape:label="R_ACS"
+ sodipodi:nodetypes="cccccccccccc" />
-
-
-
-