# HG changeset patch
# User luca_milaz
# Date 1734202208 0
# Node ID 8d1988935e1fa6fbbca25a31d38020bfdbd959be
# Parent  f9deb464e6a6823aa1a3584babe831fc5ecf253f
Uploaded

diff -r f9deb464e6a6 -r 8d1988935e1f COBRAxy/ras_to_bounds.py
--- a/COBRAxy/ras_to_bounds.py	Fri Dec 13 18:54:50 2024 +0000
+++ b/COBRAxy/ras_to_bounds.py	Sat Dec 14 18:50:08 2024 +0000
@@ -158,6 +158,8 @@
     """
     bounds = pd.DataFrame([(rxn.lower_bound, rxn.upper_bound) for rxn in model.reactions], index=rxns_ids, columns=["lower_bound", "upper_bound"])
     new_bounds = apply_ras_bounds(bounds, ras_row)
+    if new_bounds.isnull().values.any():
+        warning(f"RAS values for {cellName} contain NaN values. Skipping this cell.")
     new_bounds.to_csv(output_folder + cellName + ".csv", sep='\t', index=True)
     pass