# HG changeset patch
# User luca_milaz
# Date 1734433646 0
# Node ID e71edb2585e6a4c999c8da2bd71a35b25ba4c0ab
# Parent  55ad01b84c7f20b6084b1e6b4de9e25a3ab71a84
Uploaded

diff -r 55ad01b84c7f -r e71edb2585e6 COBRAxy/flux_to_map.py
--- a/COBRAxy/flux_to_map.py	Tue Dec 17 11:04:35 2024 +0000
+++ b/COBRAxy/flux_to_map.py	Tue Dec 17 11:07:26 2024 +0000
@@ -808,7 +808,10 @@
     elif ARGS.option == "dataset_class":
         classes = read_dataset(classPath, "class")
         classes = classes.astype(str)
-
+        #check if classes have mathc on ids
+        if not all(classes.iloc[:, 0].isin(ids)):
+            utils.logWarning(
+            "No match between classes and sample IDs", ARGS.out_log)
         resolve_rules_float, ids = getDatasetValues(datasetPath, "Dataset Class (not actual name)")
         if resolve_rules_float != None: class_pat = split_class(classes, resolve_rules_float)