Mercurial > repos > bimib > cobraxy
changeset 486:14232f4c4440 draft
Uploaded
author | luca_milaz |
---|---|
date | Tue, 23 Sep 2025 10:58:08 +0000 |
parents | 12894ade26ef |
children | 6b8a7e1e8efa |
files | COBRAxy/flux_simulation_beta.xml |
diffstat | 1 files changed, 2 insertions(+), 0 deletions(-) [+] |
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--- a/COBRAxy/flux_simulation_beta.xml Tue Sep 23 07:19:49 2025 +0000 +++ b/COBRAxy/flux_simulation_beta.xml Tue Sep 23 10:58:08 2025 +0000 @@ -181,6 +181,8 @@ - Samples: reporting the sampled fluxes for each reaction (reaction names on the rows and sample names on the columns). Format: tab-separated. - a log file (.txt). +**TIP**: Bounds generated by RAStoBound are grouped in a collection. You can select collections by clicking on "Dataset Collection" option in the "Bound file(s):" input parameter. + **TIP**: The Batches parameter helps maintain memory efficiency. For 10,000 samples, use n_samples=1,000 and n_batches=10. **TIP**: The Thinning parameter for OPTGP helps converge to stationary distribution.