Mercurial > repos > bimib > cobraxy

changeset 149:8f47c038cc28 draft

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Uploaded
author luca_milaz
date Wed, 06 Nov 2024 20:57:23 +0000
parents 5683406a8cfd
children 834009d1a094
files COBRAxy/flux_to_map.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
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line diff
--- a/COBRAxy/flux_to_map.xml	Wed Nov 06 20:57:11 2024 +0000
+++ b/COBRAxy/flux_to_map.xml	Wed Nov 06 20:57:23 2024 +0000
@@ -155,7 +155,8 @@
 
 The tool generates:
     - 1) a tab-separated file: reporting fold-change and p-values of fluxes between a pair of conditions/classes;
-    - 2) a metabolic map file (downloadable as .svg): visualizing up- and down-regulated reactions between a pair of conditions/classes;
+    - 2) a metabolic map file (downloadable as .svg and .png): visualizing up- and down-regulated reactions between a pair of conditions/classes;
+	- 3) two metabolic maps to visualize the mean and median fluxes normalized amongst all classes. The associated color map with values bounds is also generated.
     - 3) a log file (.txt).
     
 Output options: