Mercurial > repos > bimib > cobraxy

changeset 186:f0197057876c draft

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Uploaded
author francesco_lapi
date Wed, 20 Nov 2024 17:35:25 +0000
parents c933b2c6a39e
children 5581ce89f15e
files COBRAxy/flux_to_map.py
diffstat 1 files changed, 3 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/COBRAxy/flux_to_map.py	Wed Nov 20 17:27:41 2024 +0000
+++ b/COBRAxy/flux_to_map.py	Wed Nov 20 17:35:25 2024 +0000
@@ -331,6 +331,8 @@
 def getArrowBodyElementId(reactionId :str) -> str:
     if reactionId.endswith("_RV"): reactionId = reactionId[:-3] #TODO: standardize _RV
     elif ReactionDirection.fromReactionId(reactionId) is not ReactionDirection.Unknown: reactionId = reactionId[:-2]
+    if 'r1050' in reactionId:
+        print(reactionId)
     return f"R_{reactionId}"
 
 def getArrowHeadElementId(reactionId :str) -> Tuple[str, str]:
@@ -514,7 +516,7 @@
             arrow.styleReactionElements(metabMap, reactionId + ("_B" if inversionScore == 2 else "_F"))
             arrow.applyTo(("F_" if inversionScore == 2 else "B_") + reactionId, metabMap, f";stroke:{ArrowColor.Transparent};stroke-width:0;stroke-dasharray:None")
 
-        arrow.styleReactionElements(metabMap, reactionId, mindReactionDir = True)
+        arrow.styleReactionElements(metabMap, reactionId, mindReactionDir = False)
 
 
 ############################ split class ######################################