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comparison Marea/marea_cluster.xml @ 5:146cb8e171b8 draft

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revision: xml requirement version
author bimib
date Thu, 15 Nov 2018 04:52:09 -0500
parents cf3d3d8f4ef5
children 5721182715a7
comparison
equal deleted inserted replaced
4:cf3d3d8f4ef5 5:146cb8e171b8
2 <description>of Reaction Activity Scores</description> 2 <description>of Reaction Activity Scores</description>
3 <macros> 3 <macros>
4 <import>marea_macros.xml</import> 4 <import>marea_macros.xml</import>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
7 <requirement type="package">pandas</requirement> 7 <requirement type="package" version="0.23.0">pandas</requirement>
8 <requirement type="package">scipy</requirement> 8 <requirement type="package" version="1.1.0">scipy</requirement>
9 <requirement type="package">cobra</requirement> 9 <requirement type="package" version="0.11.3">cobra</requirement>
10 <requirement type="package">python-libsbml</requirement> 10 <requirement type="package" version="5.17.0">python-libsbml</requirement>
11 <requirement type="package">scikit-learn</requirement> 11 <requirement type="package" version="0.19.1">scikit-learn</requirement>
12 <requirement type="package">matplotlib</requirement> 12 <requirement type="package" version="2.2.2">matplotlib</requirement>
13 </requirements> 13 </requirements>
14 <command detect_errors="exit_code"> 14 <command detect_errors="exit_code">
15 <![CDATA[ 15 <![CDATA[
16 python $__tool_directory__/marea_cluster.py 16 python $__tool_directory__/marea_cluster.py
17 --rules_selector $cond_rule.rules_selector 17 --rules_selector $cond_rule.rules_selector