# HG changeset patch
# User bimib
# Date 1584286127 14400
# Node ID 68375ead0ee4d49a32d59b675cb95d8c8653829c
# Parent  39238e5840ae218f863bd2f87f2aa92ae1aa7438
Uploaded

diff -r 39238e5840ae -r 68375ead0ee4 Marea/marea.py
--- a/Marea/marea.py	Sun Mar 15 11:22:00 2020 -0400
+++ b/Marea/marea.py	Sun Mar 15 11:28:47 2020 -0400
@@ -709,8 +709,8 @@
             tmp_csv.to_csv(tab, sep = '\t', index = False, header = header)
             
             if create_svg or create_pdf:
-                if args.rules_selector == 'HMRcore' or (args.rules_selector == 'Custom'
-                                                        and args.yes_no == 'yes'):
+                if args.custom_rules == 'false' or (args.custom_rules == 'true'
+                                                        and args.custom_map != ''):
                     fix_map(tmp, core_map, threshold_P_V, threshold_F_C, max_F_C)
                     file_svg = 'result/' + single_cluster + '_vs_ rest (SVG Map).svg'
                     with open(file_svg, 'wb') as new_map:
@@ -748,8 +748,8 @@
             tmp_csv.to_csv(tab, sep = '\t', index = False, header = header)
             
             if create_svg or create_pdf:
-                if args.rules_selector == 'HMRcore' or (args.rules_selector == 'Custom'
-                                                        and args.yes_no == 'yes'):
+                if args.custom_rules == 'false' or (args.custom_rules == 'true'
+                                                        and args.custom_map != ''):
                     fix_map(tmp, core_map, threshold_P_V, threshold_F_C, max_F_C)
                     file_svg = 'result/' + i + '_vs_' + j + ' (SVG Map).svg'
                     with open(file_svg, 'wb') as new_map: