Mercurial > repos > bimib > marea_2
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author | luca_milaz |
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date | Wed, 18 Sep 2024 09:21:05 +0000 |
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# Official repository for the MaREA toolset > MaREA (Metabolic Reaction Enrichment Analysis) is a user-friendly tool that allows a user to characterize and to graphically compare groups of samples with different transcriptional regulation of metabolism, as estimated from cross-sectional RNA-seq data. The tool is available as plug-in for the widely-used Galaxy platform for comparative genomics and bioinformatics analyses. ## Useful links: - Paper: https://pubmed.ncbi.nlm.nih.gov/32373287/ - MaREA4Galaxy: https://galaxyproject.org/use/marea4galaxy/ - Galaxy project: https://usegalaxy.org/ ## Documentation: - marea : https://colab.research.google.com/drive/1E77uGwqimuTioP7Ss_2yyXZ82XTGnA4i - ras_generator : https://colab.research.google.com/drive/1J3jQxe4DveDC59ZHTgt6n1BpX_g3FLLB - rps_generator : https://colab.research.google.com/drive/1MTLXhqceZNvis0El3Wh2vjRbWL6vpOW7 - marea_cluster : https://colab.research.google.com/drive/15tLssgX9UHsbptNaBMwhAkfuyPdenxQX - testing : https://colab.research.google.com/drive/1QQZNwClUT8gvDMg8F9HIhS-Nmq6FvSzE - custom_data_generator : https://colab.research.google.com/drive/1mkbCjf4w7fcB9Qbtp7Y_N9wYLvD3S54b