# HG changeset patch
# User luca_milaz
# Date 1721418869 0
# Node ID 5229ce78799d2a107a358d31043a1e97b8c5a0a2
# Parent  74b162f74f4a1da9a9ec34b1045bc650e2d59a83
Uploaded

diff -r 74b162f74f4a -r 5229ce78799d marea_2/custom_data_generator.py
--- a/marea_2/custom_data_generator.py	Fri Jul 19 19:51:19 2024 +0000
+++ b/marea_2/custom_data_generator.py	Fri Jul 19 19:54:29 2024 +0000
@@ -120,18 +120,18 @@
     return reactionUtils.create_reaction_dict(unparsedReactions)
 
 def get_medium(model:cobra.Model) -> list:
-  trueMedium=[]
-  for r in model.reactions:
-    positiveCoeff=0
-    for m in r.metabolites:
-      if r.get_coefficient(m.id)>0:
-        positiveCoeff=1;
-    if (positiveCoeff==0 and r.lower_bound<0):
-      trueMedium.append(r)
+    trueMedium=[]
+    for r in model.reactions:
+        positiveCoeff=0
+        for m in r.metabolites:
+            if r.get_coefficient(m.id)>0:
+                positiveCoeff=1;
+        if (positiveCoeff==0 and r.lower_bound<0):
+            trueMedium.append(r)
 
     df_medium = pd.DataFrame(columns="Reaction")
     df_medium["Reaction"] = trueMedium
-  return df_medium
+    return df_medium
 
 def generate_bounds(model:cobra.Model) -> Dict[ReactionId, Tuple[float, float]]: