# HG changeset patch
# User luca_milaz
# Date 1726734303 0
# Node ID c24bc5bd4a93555872d2dfd1448c068e0330956b
# Parent 5443289f6edb02677a38dc8dd0aade17418a6172
Uploaded
diff -r 5443289f6edb -r c24bc5bd4a93 marea_2/custom_data_generator.xml
--- a/marea_2/custom_data_generator.xml Thu Sep 19 08:24:51 2024 +0000
+++ b/marea_2/custom_data_generator.xml Thu Sep 19 08:25:03 2024 +0000
@@ -16,26 +16,24 @@
python $__tool_directory__/custom_data_generator.py
--input $input
--name $input.element_identifier
- --output_format $output_format
--out_log $log
+ --out_rules $rules
+ --out_reactions $reactions
+ --out_bounds $bounds
+ --out_medium $medium
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@@ -54,10 +52,10 @@
-------------
The tool generates:
- - rules: reporting the rules for each reaction in the custom model given. Format: csv or pickle.
- - reactions: reporting the reactions in the custom model given. Format: csv or pickle.
- - reaction bounds: reporting the lower and upper bounds of each model reaction. Format: csv or pickle.
- - medium composition: reporting the list of exchange/transport reactions. Format: csv or pickle.
+ - rules: reporting the rules for each reaction in the custom model given. Format: csv (tab separated).
+ - reactions: reporting the reactions in the custom model given. Format: csv (tab separated).
+ - reaction bounds: reporting the lower and upper bounds of each model reaction. Format: csv (tab separated).
+ - medium composition: reporting the list of exchange/transport reactions. Format: csv (tab separated).
- a log file (.txt).
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