changeset 246:caf79d752eb4 draft

Uploaded
author luca_milaz
date Sun, 04 Aug 2024 12:34:44 +0000
parents 42e55436179a
children 6c3e7c338b93
files marea_2/flux_to_map.py
diffstat 1 files changed, 11 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/marea_2/flux_to_map.py	Sat Aug 03 14:22:26 2024 +0000
+++ b/marea_2/flux_to_map.py	Sun Aug 04 12:34:44 2024 +0000
@@ -813,6 +813,12 @@
     dataset = dataset.drop(dataset.columns[0], axis = "columns").to_dict("list")
     return { id : list(map(utils.Float("Dataset values, not an argument"), values)) for id, values in dataset.items() }, IDs
 
+def computeEnrichmentMedoids(metabMap :ET.ElementTree, class_pat :Dict[str, List[List[float]]], ids :List[str]) -> None:
+    utils.logWarning(
+        print(class_pat),
+        ARGS.out_log)
+        
+
 ############################ MAIN #############################################
 def main() -> None:
     """
@@ -838,6 +844,11 @@
     # solution can be derived from my comment in FilePath.fromStrPath
 
     ids, class_pat = getClassesAndIdsFromDatasets(ARGS.input_datas_fluxes, ARGS.input_data_fluxes, ARGS.input_class_fluxes, ARGS.names_fluxes)
+
+    computeEnrichmentMedoids(core_map, class_pat, ids)
+
+    pass
+
     computeEnrichment(core_map, class_pat, ids)
     
     # create output files: TODO: this is the same comparison happening in "maps", find a better way to organize this