Mercurial > repos > bioinformatics_lab_ufsc > epibuilder
annotate test-data/command-epifinder.log @ 0:ef26009cd70a draft
Uploaded version 1.1
| author | bioinformatics_lab_ufsc |
|---|---|
| date | Thu, 25 Nov 2021 01:26:36 +0000 |
| parents | |
| children |
| rev | line source |
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| 0 | 1 makeblastdb -dbtype prot -in /usr/local/bioinfo/stingrayGalaxy/tools/stingray/epifinder/test-data/proteom.fasta -out ./command-test_proteom Success: |
| 2 | |
| 3 | |
| 4 Building a new DB, current time: 03/20/2021 00:04:04 | |
| 5 New DB name: /usr/local/bioinfo/stingrayGalaxy/tools/stingray/epifinder/command-test_proteom | |
| 6 New DB title: /usr/local/bioinfo/stingrayGalaxy/tools/stingray/epifinder/test-data/proteom.fasta | |
| 7 Sequence type: Protein | |
| 8 Keep Linkouts: T | |
| 9 Keep MBits: T | |
| 10 Maximum file size: 1000000000B | |
| 11 Adding sequences from FASTA; added 6 sequences in 0.00420094 seconds. | |
| 12 Error: | |
| 13 blastp -query ./command-epifinder-epitopes-fasta.fasta -db ./command-test_proteom -outfmt 6 qacc sacc pident qcovs qseq sseq qacc -task blastp-short -word_size 4 -out ./command-test_proteom_blast.csv Success: | |
| 14 Error: |