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comparison test-data/command-epifinder-topology.tsv @ 0:ef26009cd70a draft

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Uploaded version 1.1
author bioinformatics_lab_ufsc
date Thu, 25 Nov 2021 01:26:36 +0000
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-1:000000000000 0:ef26009cd70a
1 N Id Method Threshold Avg Score Cover Epitope Start End N-Glyc N-Glyc-Count N-Glyc-Motifs Length kDa I.P Avg Hydropathy Avg Cover
2 1 4WFF_B Chain B of Human TRAAK K+ channel in a K+ bound nonconductive conformation BepiPred-2.0 0.60 0.65 - PETQSSHSAW 73 83 N 0 - 10 1.13 5.25 -1.40 0.98
3 Emini 0.80 2.57 0.90 EEEEEEEEE.
4 Parker 0.80 4.19 1.00 EEEEEEEEEE
5 Chou Fosman 0.80 1.13 1.00 EEEEEEEEEE
6 Karplus Schulz 0.80 1.04 1.00 EEEEEEEEEE
7 Kolaskar 0.80 0.99 1.00 EEEEEEEEEE
8 All matches - - 0.90 EEEEEEEEE.
9 N-Glyc - - - ..........
10 Hydropathy - -1.40 - --------+-
11 2 4WFF_B Chain B of Human TRAAK K+ channel in a K+ bound nonconductive conformation BepiPred-2.0 0.60 0.64 - AIFLKWHVPPELVR 149 163 N 0 - 14 1.71 8.80 0.42 0.60
12 Emini 0.80 0.82 0.43 .....EEEE.EE..
13 Parker 0.80 -1.83 0.07 .......E......
14 Chou Fosman 0.80 0.83 0.50 .....EEEEEEE..
15 Karplus Schulz 0.80 0.96 1.00 EEEEEEEEEEEEEE
16 Kolaskar 0.80 1.10 1.00 EEEEEEEEEEEEEE
17 All matches - - 0.07 .......E......
18 N-Glyc - - - ..............
19 Hydropathy - 0.42 - ++++---+---++-
20 3 4WFF_A Chain A of Human TRAAK K+ channel in a K+ bound nonconductive conformation BepiPred-2.0 0.60 0.63 - LKWHVPPELVRVLSA 150 165 N 0 - 15 1.74 8.75 0.39 0.59
21 Emini 0.80 0.81 0.40 ..EEEE.EE......
22 Parker 0.80 -1.70 0.07 ....E..........
23 Chou Fosman 0.80 0.84 0.47 ..EEEEEEE......
24 Karplus Schulz 0.80 0.96 1.00 EEEEEEEEEEEEEEE
25 Kolaskar 0.80 1.11 1.00 EEEEEEEEEEEEEEE
26 All matches - - 0.07 ....E..........
27 N-Glyc - - - ...............
28 Hydropathy - 0.39 - +---+---++-++-+