Mercurial > repos > bioinformatics_lab_ufsc > epifinder
diff test-data/command-epifinder-topology.tsv @ 4:8218eb024e5d draft default tip
Deleted selected files
| author | bioinformatics_lab_ufsc |
|---|---|
| date | Thu, 13 May 2021 18:37:32 +0000 |
| parents | 68bb74b57734 |
| children |
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--- a/test-data/command-epifinder-topology.tsv Mon Mar 29 23:44:21 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,28 +0,0 @@ -N Id Method Threshold Avg Score Cover Epitope Start End N-Glyc N-Glyc-Count N-Glyc-Motifs Length kDa I.P Avg Hydropathy Avg Cover -1 4WFF_B Chain B of Human TRAAK K+ channel in a K+ bound nonconductive conformation BepiPred-2.0 0.60 0.65 - PETQSSHSAW 73 83 N 0 - 10 1.13 5.25 -1.40 0.98 - Emini 0.80 2.57 0.90 EEEEEEEEE. - Parker 0.80 4.19 1.00 EEEEEEEEEE - Chou Fosman 0.80 1.13 1.00 EEEEEEEEEE - Karplus Schulz 0.80 1.04 1.00 EEEEEEEEEE - Kolaskar 0.80 0.99 1.00 EEEEEEEEEE - All matches - - 0.90 EEEEEEEEE. - N-Glyc - - - .......... - Hydropathy - -1.40 - --------+- -2 4WFF_B Chain B of Human TRAAK K+ channel in a K+ bound nonconductive conformation BepiPred-2.0 0.60 0.64 - AIFLKWHVPPELVR 149 163 N 0 - 14 1.71 8.80 0.42 0.60 - Emini 0.80 0.82 0.43 .....EEEE.EE.. - Parker 0.80 -1.83 0.07 .......E...... - Chou Fosman 0.80 0.83 0.50 .....EEEEEEE.. - Karplus Schulz 0.80 0.96 1.00 EEEEEEEEEEEEEE - Kolaskar 0.80 1.10 1.00 EEEEEEEEEEEEEE - All matches - - 0.07 .......E...... - N-Glyc - - - .............. - Hydropathy - 0.42 - ++++---+---++- -3 4WFF_A Chain A of Human TRAAK K+ channel in a K+ bound nonconductive conformation BepiPred-2.0 0.60 0.63 - LKWHVPPELVRVLSA 150 165 N 0 - 15 1.74 8.75 0.39 0.59 - Emini 0.80 0.81 0.40 ..EEEE.EE...... - Parker 0.80 -1.70 0.07 ....E.......... - Chou Fosman 0.80 0.84 0.47 ..EEEEEEE...... - Karplus Schulz 0.80 0.96 1.00 EEEEEEEEEEEEEEE - Kolaskar 0.80 1.11 1.00 EEEEEEEEEEEEEEE - All matches - - 0.07 ....E.......... - N-Glyc - - - ............... - Hydropathy - 0.39 - +---+---++-++-+