Mercurial > repos > bioitcore > splicetrap
diff db/hg38v3/parallel/chr19_KI270888v1_alt.aa @ 2:01169764d7ca draft
planemo upload
| author | bioitcore |
|---|---|
| date | Thu, 07 Sep 2017 15:20:40 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/db/hg38v3/parallel/chr19_KI270888v1_alt.aa Thu Sep 07 15:20:40 2017 -0400 @@ -0,0 +1,107 @@ +chr19_KI270888v1_alt 101099 102485 CA-CS-19_KI270888v1_alt-101865-101918.2[L] 0 - 101099 102485 255,0,0 3 668,53,105 0,766,1281 +chr19_KI270888v1_alt 101102 101918 AA-AA-19_KI270888v1_alt-101701-101767.0[L] 0 - 101102 101918 255,0,0 3 599,66,53 0,599,763 +chr19_KI270888v1_alt 101102 102485 CA-CS-19_KI270888v1_alt-101865-101918.0[L] 0 - 101102 102485 255,0,0 3 599,53,105 0,763,1278 +chr19_KI270888v1_alt 101102 102485 CA-CS-19_KI270888v1_alt-101865-101918.1[L] 0 - 101102 102485 255,0,0 3 665,53,105 0,763,1278 +chr19_KI270888v1_alt 101865 106802 CA-CS-19_KI270888v1_alt-102380-102485.1[L] 0 - 101865 106802 255,0,0 3 53,105,51 0,515,4886 +chr19_KI270888v1_alt 101865 110160 CA-CS-19_KI270888v1_alt-102380-102485.0[L] 0 - 101865 110160 255,0,0 3 53,105,190 0,515,8105 +chr19_KI270888v1_alt 101865 110264 CA-CS-19_KI270888v1_alt-102380-102485.2[L] 0 - 101865 110264 255,0,0 3 53,105,294 0,515,8105 +chr19_KI270888v1_alt 102380 110264 CA-CA-19_KI270888v1_alt-106751-106802.0[L] 0 - 102380 110264 255,0,0 3 105,51,294 0,4371,7590 +chr19_KI270888v1_alt 102380 110264 CA-CS-19_KI270888v1_alt-109970-110160.0[L] 0 - 102380 110264 255,0,0 3 105,190,82 0,7590,7802 +chr19_KI270888v1_alt 102380 112082 CA-CS-19_KI270888v1_alt-109970-110264.0[L] 0 - 102380 112082 255,0,0 3 105,294,300 0,7590,9402 +chr19_KI270888v1_alt 102380 114554 CA-CS-19_KI270888v1_alt-106751-106802.0[L] 0 - 102380 114554 255,0,0 3 105,51,36 0,4371,12138 +chr19_KI270888v1_alt 106751 112082 CA-CS-19_KI270888v1_alt-109970-110264.1[L] 0 - 106751 112082 255,0,0 3 51,294,300 0,3219,5031 +chr19_KI270888v1_alt 106751 114554 CA-CA-19_KI270888v1_alt-109970-110264.0[L] 0 - 106751 114554 255,0,0 3 51,294,36 0,3219,7767 +chr19_KI270888v1_alt 106751 115415 CA-CS-19_KI270888v1_alt-114518-114554.1[L] 0 - 106751 115415 255,0,0 3 51,36,69 0,7767,8595 +chr19_KI270888v1_alt 109970 110264 IR-IR-19_KI270888v1_alt-110160-110182.0[L] 0 - 109970 110264 255,0,0 3 190,22,82 0,190,212 +chr19_KI270888v1_alt 109970 112082 CA-CS-19_KI270888v1_alt-110182-110264.0[L] 0 - 109970 112082 255,0,0 3 190,82,300 0,212,1812 +chr19_KI270888v1_alt 109970 114554 CA-CA-19_KI270888v1_alt-111782-112082.0[L] 0 - 109970 114554 255,0,0 3 294,300,36 0,1812,4548 +chr19_KI270888v1_alt 109970 115415 CA-CS-19_KI270888v1_alt-114518-114554.4[L] 0 - 109970 115415 255,0,0 3 294,36,69 0,4548,5376 +chr19_KI270888v1_alt 110182 114554 CA-CS-19_KI270888v1_alt-111782-112082.1[L] 0 - 110182 114554 255,0,0 3 82,300,36 0,1600,4336 +chr19_KI270888v1_alt 111782 115413 CA-CS-19_KI270888v1_alt-114518-114554.0[L] 0 - 111782 115413 255,0,0 3 300,36,67 0,2736,3564 +chr19_KI270888v1_alt 111782 115415 CA-CS-19_KI270888v1_alt-114518-114554.5[L] 0 - 111782 115415 255,0,0 3 300,36,69 0,2736,3564 +chr19_KI270888v1_alt 111782 115469 CA-CS-19_KI270888v1_alt-114518-114554.2[L] 0 - 111782 115469 255,0,0 3 300,36,123 0,2736,3564 +chr19_KI270888v1_alt 111782 129424 CA-CS-19_KI270888v1_alt-114518-114554.3[L] 0 - 111782 129424 255,0,0 3 300,36,45 0,2736,17597 +chr19_KI270888v1_alt 13016 16938 CA-CS-19_KI270888v1_alt-14889-15189.0[L] 0 - 13016 16938 255,0,0 3 294,300,285 0,1873,3637 +chr19_KI270888v1_alt 140461 143807 CA-CS-19_KI270888v1_alt-140966-141017.0[L] 0 - 140461 143807 255,0,0 3 357,51,303 0,505,3043 +chr19_KI270888v1_alt 140966 144357 CA-CS-19_KI270888v1_alt-143504-143807.0[L] 0 - 140966 144357 255,0,0 3 51,303,297 0,2538,3094 +chr19_KI270888v1_alt 143504 144876 CA-CS-19_KI270888v1_alt-144060-144357.0[L] 0 - 143504 144876 255,0,0 3 303,297,310 0,556,1062 +chr19_KI270888v1_alt 144060 145310 CA-CS-19_KI270888v1_alt-144566-144876.0[L] 0 - 144060 145310 255,0,0 3 297,310,285 0,506,965 +chr19_KI270888v1_alt 144566 145996 CA-CS-19_KI270888v1_alt-145025-145310.0[L] 0 - 144566 145996 255,0,0 3 310,285,523 0,459,907 +chr19_KI270888v1_alt 14889 17716 CA-CS-19_KI270888v1_alt-16653-16938.0[L] 0 - 14889 17716 255,0,0 3 300,285,36 0,1764,2791 +chr19_KI270888v1_alt 16653 18474 CA-CS-19_KI270888v1_alt-17680-17716.0[L] 0 - 16653 18474 255,0,0 3 285,36,67 0,1027,1754 +chr19_KI270888v1_alt 1713 21165 CA-CS-19_KI270888v1_alt-20455-21014.1[L] 0 - 1713 21165 255,0,0 3 135,559,53 0,18742,19399 +chr19_KI270888v1_alt 1714 3125 CA-CS-19_KI270888v1_alt-2507-2560.0[L] 0 - 1714 3125 255,0,0 3 694,53,105 0,793,1306 +chr19_KI270888v1_alt 1722 37403 CA-CS-19_KI270888v1_alt-20544-20816.0[L] 0 - 1722 37403 255,0,0 3 215,272,198 0,18822,35483 +chr19_KI270888v1_alt 1834 21124 CA-CS-19_KI270888v1_alt-20455-21014.0[L] 0 - 1834 21124 255,0,0 3 14,559,12 0,18621,19278 +chr19_KI270888v1_alt 20346 21732 CA-CS-19_KI270888v1_alt-21112-21165.2[L] 0 - 20346 21732 255,0,0 3 668,53,105 0,766,1281 +chr19_KI270888v1_alt 20455 21164 CA-CS-19_KI270888v1_alt-21112-21124.0[L] 0 - 20455 21164 255,0,0 3 559,12,38 0,657,671 +chr19_KI270888v1_alt 20455 21732 CA-CS-19_KI270888v1_alt-21112-21165.3[L] 0 - 20455 21732 255,0,0 3 559,53,105 0,657,1172 +chr19_KI270888v1_alt 20544 37574 CA-CS-19_KI270888v1_alt-37205-37403.0[L] 0 - 20544 37574 255,0,0 3 272,198,53 0,16661,16977 +chr19_KI270888v1_alt 20785 21732 CA-CS-19_KI270888v1_alt-21112-21165.1[L] 0 - 20785 21732 255,0,0 3 229,53,105 0,327,842 +chr19_KI270888v1_alt 20799 21732 CA-CS-19_KI270888v1_alt-21112-21165.0[L] 0 - 20799 21732 255,0,0 3 215,53,105 0,313,828 +chr19_KI270888v1_alt 21112 106802 CA-CS-19_KI270888v1_alt-21627-21732.0[L] 0 - 21112 106802 255,0,0 3 53,105,51 0,515,85639 +chr19_KI270888v1_alt 21112 21165 CA-CS-19_KI270888v1_alt-21126-21164.0[L] 0 - 21112 21165 255,0,0 3 12,38,1 0,14,52 +chr19_KI270888v1_alt 21112 26048 CA-CS-19_KI270888v1_alt-21627-21732.3[L] 0 - 21112 26048 255,0,0 3 53,105,51 0,515,4885 +chr19_KI270888v1_alt 21112 29406 CA-CS-19_KI270888v1_alt-21627-21732.1[L] 0 - 21112 29406 255,0,0 3 53,105,190 0,515,8104 +chr19_KI270888v1_alt 21126 21732 CA-CS-19_KI270888v1_alt-21164-21165.0[L] 0 - 21126 21732 255,0,0 3 38,1,105 0,38,501 +chr19_KI270888v1_alt 21164 42474 CA-CS-19_KI270888v1_alt-21627-21732.2[L] 0 - 21164 42474 255,0,0 3 1,105,51 0,463,21259 +chr19_KI270888v1_alt 21627 110264 CA-CS-19_KI270888v1_alt-106751-106802.1[L] 0 - 21627 110264 255,0,0 3 105,51,294 0,85124,88343 +chr19_KI270888v1_alt 21627 29406 CA-CA-19_KI270888v1_alt-25997-26048.0[L] 0 - 21627 29406 255,0,0 3 105,51,190 0,4370,7589 +chr19_KI270888v1_alt 21627 29510 CA-CS-19_KI270888v1_alt-25997-26048.1[L] 0 - 21627 29510 255,0,0 3 105,51,294 0,4370,7589 +chr19_KI270888v1_alt 21627 29510 CA-CS-19_KI270888v1_alt-29216-29406.0[L] 0 - 21627 29510 255,0,0 3 105,190,82 0,7589,7801 +chr19_KI270888v1_alt 21627 45937 CA-CS-19_KI270888v1_alt-42423-42474.1[L] 0 - 21627 45937 255,0,0 3 105,51,294 0,20796,24016 +chr19_KI270888v1_alt 21627 93970 CA-CS-19_KI270888v1_alt-25997-26048.0[L] 0 - 21627 93970 255,0,0 3 105,51,294 0,4370,72049 +chr19_KI270888v1_alt 2507 13310 CA-CS-19_KI270888v1_alt-3020-3125.0[L] 0 - 2507 13310 255,0,0 3 53,105,294 0,513,10509 +chr19_KI270888v1_alt 2507 9850 CA-CS-19_KI270888v1_alt-3020-3125.1[L] 0 - 2507 9850 255,0,0 3 53,105,51 0,513,7292 +chr19_KI270888v1_alt 25997 112082 CA-CS-19_KI270888v1_alt-93676-93970.0[L] 0 - 25997 112082 255,0,0 3 51,294,300 0,67679,85785 +chr19_KI270888v1_alt 25997 29510 CA-CS-19_KI270888v1_alt-29216-29406.1[L] 0 - 25997 29510 255,0,0 3 51,190,82 0,3219,3431 +chr19_KI270888v1_alt 25997 31362 CA-CS-19_KI270888v1_alt-29216-29510.0[L] 0 - 25997 31362 255,0,0 3 51,294,300 0,3219,5065 +chr19_KI270888v1_alt 25997 95784 CA-CS-19_KI270888v1_alt-93676-93970.1[L] 0 - 25997 95784 255,0,0 3 51,294,300 0,67679,69487 +chr19_KI270888v1_alt 29216 29510 IR-IR-19_KI270888v1_alt-29406-29428.0[L] 0 - 29216 29510 255,0,0 3 190,22,82 0,190,212 +chr19_KI270888v1_alt 29216 31362 CA-CS-19_KI270888v1_alt-29428-29510.0[L] 0 - 29216 31362 255,0,0 3 190,82,300 0,212,1846 +chr19_KI270888v1_alt 29216 33859 CA-CS-19_KI270888v1_alt-31062-31362.1[L] 0 - 29216 33859 255,0,0 3 294,300,36 0,1846,4607 +chr19_KI270888v1_alt 29428 33859 CA-CS-19_KI270888v1_alt-31062-31362.0[L] 0 - 29428 33859 255,0,0 3 82,300,36 0,1634,4395 +chr19_KI270888v1_alt 3020 13310 CA-CA-19_KI270888v1_alt-9799-9850.0[L] 0 - 3020 13310 255,0,0 3 105,51,294 0,6779,9996 +chr19_KI270888v1_alt 3020 15189 CA-CS-19_KI270888v1_alt-13016-13310.0[L] 0 - 3020 15189 255,0,0 3 105,294,300 0,9996,11869 +chr19_KI270888v1_alt 31062 34826 CA-CS-19_KI270888v1_alt-33823-33859.0[L] 0 - 31062 34826 255,0,0 3 300,36,123 0,2761,3641 +chr19_KI270888v1_alt 33645 82916 CA-CS-19_KI270888v1_alt-81779-81976.0[L] 0 + 33645 82916 255,0,0 3 41,197,302 0,48134,48969 +chr19_KI270888v1_alt 33645 82916 CA-CS-19_KI270888v1_alt-81779-82043.0[L] 0 + 33645 82916 255,0,0 3 41,264,306 0,48134,48965 +chr19_KI270888v1_alt 36723 38141 CA-CS-19_KI270888v1_alt-37521-37574.1[L] 0 - 36723 38141 255,0,0 3 680,53,105 0,798,1313 +chr19_KI270888v1_alt 37205 38141 CA-CS-19_KI270888v1_alt-37521-37574.0[L] 0 - 37205 38141 255,0,0 3 198,53,105 0,316,831 +chr19_KI270888v1_alt 37521 42474 CA-CS-19_KI270888v1_alt-38036-38141.0[L] 0 - 37521 42474 255,0,0 3 53,105,51 0,515,4902 +chr19_KI270888v1_alt 37521 90404 CA-CS-19_KI270888v1_alt-38036-38141.1[L] 0 - 37521 90404 255,0,0 3 53,105,51 0,515,52832 +chr19_KI270888v1_alt 38036 45937 CA-CS-19_KI270888v1_alt-42423-42474.0[L] 0 - 38036 45937 255,0,0 3 105,51,294 0,4387,7607 +chr19_KI270888v1_alt 38036 93970 CA-CS-19_KI270888v1_alt-90353-90404.1[L] 0 - 38036 93970 255,0,0 3 105,51,294 0,52317,55640 +chr19_KI270888v1_alt 42423 47789 CA-CS-19_KI270888v1_alt-45643-45937.0[L] 0 - 42423 47789 255,0,0 3 51,294,300 0,3220,5066 +chr19_KI270888v1_alt 45643 49187 CA-CS-19_KI270888v1_alt-47489-47789.2[L] 0 - 45643 49187 255,0,0 3 294,300,285 0,1846,3259 +chr19_KI270888v1_alt 45643 49967 CA-CS-19_KI270888v1_alt-47489-47789.1[L] 0 - 45643 49967 255,0,0 3 294,300,36 0,1846,4288 +chr19_KI270888v1_alt 45643 51041 CA-CS-19_KI270888v1_alt-47489-47789.0[L] 0 - 45643 51041 255,0,0 3 294,300,71 0,1846,5327 +chr19_KI270888v1_alt 47489 49967 CA-CA-19_KI270888v1_alt-48902-49187.0[L] 0 - 47489 49967 255,0,0 3 300,285,36 0,1413,2442 +chr19_KI270888v1_alt 47489 51041 CA-CA-19_KI270888v1_alt-49931-49967.0[L] 0 - 47489 51041 255,0,0 3 300,36,71 0,2442,3481 +chr19_KI270888v1_alt 48902 51041 CA-CS-19_KI270888v1_alt-49931-49967.0[L] 0 - 48902 51041 255,0,0 3 285,36,71 0,1029,2068 +chr19_KI270888v1_alt 48902 51067 CA-CS-19_KI270888v1_alt-49931-49967.1[L] 0 - 48902 51067 255,0,0 3 285,36,97 0,1029,2068 +chr19_KI270888v1_alt 52988 54382 CA-CS-19_KI270888v1_alt-53763-53815.0[L] 0 - 52988 54382 255,0,0 3 676,52,105 0,775,1289 +chr19_KI270888v1_alt 52988 54382 CA-CS-19_KI270888v1_alt-53763-53816.0[L] 0 - 52988 54382 255,0,0 3 676,53,105 0,775,1289 +chr19_KI270888v1_alt 52988 58675 CA-CS-19_KI270888v1_alt-53763-53816.1[L] 0 - 52988 58675 255,0,0 3 676,53,51 0,775,5636 +chr19_KI270888v1_alt 53763 54382 AA-AA-19_KI270888v1_alt-53815-53816.0[L] 0 - 53763 54382 255,0,0 3 52,1,105 0,52,514 +chr19_KI270888v1_alt 53763 58675 CA-CA-19_KI270888v1_alt-54277-54382.0[L] 0 - 53763 58675 255,0,0 3 53,105,51 0,514,4861 +chr19_KI270888v1_alt 53763 58675 CA-CS-19_KI270888v1_alt-54277-54382.0[L] 0 - 53763 58675 255,0,0 3 52,105,51 0,514,4861 +chr19_KI270888v1_alt 53763 61564 CA-CS-19_KI270888v1_alt-58624-58675.0[L] 0 - 53763 61564 255,0,0 3 53,51,294 0,4861,7507 +chr19_KI270888v1_alt 54277 61564 CA-CS-19_KI270888v1_alt-58624-58675.1[L] 0 - 54277 61564 255,0,0 3 105,51,294 0,4347,6993 +chr19_KI270888v1_alt 58624 62722 CA-CS-19_KI270888v1_alt-61270-61564.0[L] 0 - 58624 62722 255,0,0 3 51,294,285 0,2646,3813 +chr19_KI270888v1_alt 61270 63658 CA-CS-19_KI270888v1_alt-62437-62722.0[L] 0 - 61270 63658 255,0,0 3 294,285,36 0,1167,2352 +chr19_KI270888v1_alt 62437 63937 CA-CS-19_KI270888v1_alt-63622-63658.0[L] 0 - 62437 63937 255,0,0 3 285,36,80 0,1185,1420 +chr19_KI270888v1_alt 81779 83141 CA-CS-19_KI270888v1_alt-82610-82916.0[L] 0 + 81779 83141 255,0,0 3 264,306,167 0,831,1195 +chr19_KI270888v1_alt 81779 83141 CA-CS-19_KI270888v1_alt-82614-82916.0[L] 0 + 81779 83141 255,0,0 3 197,302,167 0,835,1195 +chr19_KI270888v1_alt 84683 86088 CA-CS-19_KI270888v1_alt-85471-85524.1[L] 0 - 84683 86088 255,0,0 3 690,53,102 0,788,1303 +chr19_KI270888v1_alt 84685 86088 CA-CS-19_KI270888v1_alt-85471-85524.0[L] 0 - 84685 86088 255,0,0 3 688,53,102 0,786,1301 +chr19_KI270888v1_alt 85471 90404 CA-CS-19_KI270888v1_alt-85986-86088.0[L] 0 - 85471 90404 255,0,0 3 53,102,51 0,515,4882 +chr19_KI270888v1_alt 85986 93970 CA-CS-19_KI270888v1_alt-90353-90404.0[L] 0 - 85986 93970 255,0,0 3 102,51,294 0,4367,7690 +chr19_KI270888v1_alt 90353 95784 CA-CS-19_KI270888v1_alt-93676-93970.2[L] 0 - 90353 95784 255,0,0 3 51,294,300 0,3323,5131 +chr19_KI270888v1_alt 93676 114554 CA-CS-19_KI270888v1_alt-111782-112082.0[L] 0 - 93676 114554 255,0,0 3 294,300,36 0,18106,20842 +chr19_KI270888v1_alt 93676 98256 CA-CS-19_KI270888v1_alt-95484-95784.0[L] 0 - 93676 98256 255,0,0 3 294,300,36 0,1808,4544 +chr19_KI270888v1_alt 95484 129426 CA-CS-19_KI270888v1_alt-98220-98256.3[L] 0 - 95484 129426 255,0,0 3 300,36,47 0,2736,33895 +chr19_KI270888v1_alt 95484 99227 CA-CS-19_KI270888v1_alt-98220-98256.0[L] 0 - 95484 99227 255,0,0 3 300,36,63 0,2736,3680 +chr19_KI270888v1_alt 95484 99235 CA-CS-19_KI270888v1_alt-98220-98256.1[L] 0 - 95484 99235 255,0,0 3 300,36,71 0,2736,3680 +chr19_KI270888v1_alt 95484 99236 CA-CS-19_KI270888v1_alt-98220-98256.2[L] 0 - 95484 99236 255,0,0 3 300,36,72 0,2736,3680 +chr19_KI270888v1_alt 9799 15189 CA-CS-19_KI270888v1_alt-13016-13310.1[L] 0 - 9799 15189 255,0,0 3 51,294,300 0,3217,5090
