Mercurial > repos > bioitcore > splicetrap
diff db/hg38v3/parallel/chr19_KI270890v1_alt.aa @ 2:01169764d7ca draft
planemo upload
| author | bioitcore |
|---|---|
| date | Thu, 07 Sep 2017 15:20:40 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/db/hg38v3/parallel/chr19_KI270890v1_alt.aa Thu Sep 07 15:20:40 2017 -0400 @@ -0,0 +1,116 @@ +chr19_KI270890v1_alt 107965 111618 CA-CS-19_KI270890v1_alt-110758-110794.0[L] 0 - 107965 111618 255,0,0 3 300,36,71 0,2793,3582 +chr19_KI270890v1_alt 110705 112067 CA-CS-19_KI270890v1_alt-111536-111842.0[L] 0 + 110705 112067 255,0,0 3 264,306,167 0,831,1195 +chr19_KI270890v1_alt 110705 112067 CA-CS-19_KI270890v1_alt-111540-111842.0[L] 0 + 110705 112067 255,0,0 3 197,302,167 0,835,1195 +chr19_KI270890v1_alt 113609 115014 CA-CS-19_KI270890v1_alt-114397-114450.1[L] 0 - 113609 115014 255,0,0 3 690,53,102 0,788,1303 +chr19_KI270890v1_alt 113611 115014 CA-CS-19_KI270890v1_alt-114397-114450.0[L] 0 - 113611 115014 255,0,0 3 688,53,102 0,786,1301 +chr19_KI270890v1_alt 113616 131403 CA-CS-19_KI270890v1_alt-130783-130836.2[L] 0 - 113616 131403 255,0,0 3 683,53,105 0,17167,17682 +chr19_KI270890v1_alt 114397 119330 CA-CS-19_KI270890v1_alt-114912-115014.0[L] 0 - 114397 119330 255,0,0 3 53,102,51 0,515,4882 +chr19_KI270890v1_alt 114912 115014 IR-IR-19_KI270890v1_alt-114959-114969.0[L] 0 - 114912 115014 255,0,0 3 47,10,45 0,47,57 +chr19_KI270890v1_alt 114912 119330 CA-CS-19_KI270890v1_alt-114969-115014.0[L] 0 - 114912 119330 255,0,0 3 47,45,51 0,57,4367 +chr19_KI270890v1_alt 114912 122888 CA-CS-19_KI270890v1_alt-119279-119330.1[L] 0 - 114912 122888 255,0,0 3 102,51,294 0,4367,7682 +chr19_KI270890v1_alt 114969 122888 CA-CS-19_KI270890v1_alt-119279-119330.0[L] 0 - 114969 122888 255,0,0 3 45,51,294 0,4310,7625 +chr19_KI270890v1_alt 119279 124702 CA-CS-19_KI270890v1_alt-122594-122888.0[L] 0 - 119279 124702 255,0,0 3 51,294,300 0,3315,5123 +chr19_KI270890v1_alt 122594 127174 CA-CS-19_KI270890v1_alt-124402-124702.0[L] 0 - 122594 127174 255,0,0 3 294,300,36 0,1808,4544 +chr19_KI270890v1_alt 124402 128123 CA-CS-19_KI270890v1_alt-127138-127174.1[L] 0 - 124402 128123 255,0,0 3 300,36,41 0,2736,3680 +chr19_KI270890v1_alt 124402 128145 CA-CS-19_KI270890v1_alt-127138-127174.0[L] 0 - 124402 128145 255,0,0 3 300,36,63 0,2736,3680 +chr19_KI270890v1_alt 124402 128154 CA-CS-19_KI270890v1_alt-127138-127174.2[L] 0 - 124402 128154 255,0,0 3 300,36,72 0,2736,3680 +chr19_KI270890v1_alt 130020 130836 AA-AA-19_KI270890v1_alt-130619-130685.0[L] 0 - 130020 130836 255,0,0 3 599,66,53 0,599,763 +chr19_KI270890v1_alt 130020 131403 CA-CS-19_KI270890v1_alt-130783-130836.0[L] 0 - 130020 131403 255,0,0 3 665,53,105 0,763,1278 +chr19_KI270890v1_alt 130020 131403 CA-CS-19_KI270890v1_alt-130783-130836.1[L] 0 - 130020 131403 255,0,0 3 599,53,105 0,763,1278 +chr19_KI270890v1_alt 130783 135720 CA-CS-19_KI270890v1_alt-131298-131403.0[L] 0 - 130783 135720 255,0,0 3 53,105,51 0,515,4886 +chr19_KI270890v1_alt 130783 139182 CA-CS-19_KI270890v1_alt-131298-131403.1[L] 0 - 130783 139182 255,0,0 3 53,105,294 0,515,8105 +chr19_KI270890v1_alt 13129 17051 CA-CS-19_KI270890v1_alt-15002-15302.0[L] 0 - 13129 17051 255,0,0 3 294,300,285 0,1873,3637 +chr19_KI270890v1_alt 131298 139182 CA-CA-19_KI270890v1_alt-135669-135720.0[L] 0 - 131298 139182 255,0,0 3 105,51,294 0,4371,7590 +chr19_KI270890v1_alt 131298 141000 CA-CS-19_KI270890v1_alt-138888-139182.0[L] 0 - 131298 141000 255,0,0 3 105,294,300 0,7590,9402 +chr19_KI270890v1_alt 131298 143472 CA-CS-19_KI270890v1_alt-135669-135720.0[L] 0 - 131298 143472 255,0,0 3 105,51,36 0,4371,12138 +chr19_KI270890v1_alt 135669 139182 CA-CS-19_KI270890v1_alt-138888-139078.1[L] 0 - 135669 139182 255,0,0 3 51,190,82 0,3219,3431 +chr19_KI270890v1_alt 135669 141000 CA-CS-19_KI270890v1_alt-138888-139182.1[L] 0 - 135669 141000 255,0,0 3 51,294,300 0,3219,5031 +chr19_KI270890v1_alt 135669 143472 CA-CA-19_KI270890v1_alt-138888-139182.0[L] 0 - 135669 143472 255,0,0 3 51,294,36 0,3219,7767 +chr19_KI270890v1_alt 135669 144333 CA-CS-19_KI270890v1_alt-143436-143472.4[L] 0 - 135669 144333 255,0,0 3 51,36,69 0,7767,8595 +chr19_KI270890v1_alt 138888 139182 IR-IR-19_KI270890v1_alt-139078-139100.0[L] 0 - 138888 139182 255,0,0 3 190,22,82 0,190,212 +chr19_KI270890v1_alt 138888 141000 CA-CS-19_KI270890v1_alt-139100-139182.0[L] 0 - 138888 141000 255,0,0 3 190,82,300 0,212,1812 +chr19_KI270890v1_alt 138888 143472 CA-CA-19_KI270890v1_alt-140700-141000.0[L] 0 - 138888 143472 255,0,0 3 294,300,36 0,1812,4548 +chr19_KI270890v1_alt 138888 144333 CA-CS-19_KI270890v1_alt-143436-143472.2[L] 0 - 138888 144333 255,0,0 3 294,36,69 0,4548,5376 +chr19_KI270890v1_alt 139100 143472 CA-CS-19_KI270890v1_alt-140700-141000.0[L] 0 - 139100 143472 255,0,0 3 82,300,36 0,1600,4336 +chr19_KI270890v1_alt 140700 144333 CA-CS-19_KI270890v1_alt-143436-143472.1[L] 0 - 140700 144333 255,0,0 3 300,36,69 0,2736,3564 +chr19_KI270890v1_alt 140700 144335 CA-CS-19_KI270890v1_alt-143436-143472.3[L] 0 - 140700 144335 255,0,0 3 300,36,71 0,2736,3564 +chr19_KI270890v1_alt 140700 144387 CA-CS-19_KI270890v1_alt-143436-143472.0[L] 0 - 140700 144387 255,0,0 3 300,36,123 0,2736,3564 +chr19_KI270890v1_alt 146321 147608 CA-CS-19_KI270890v1_alt-146988-147041.0[L] 0 - 146321 147608 255,0,0 3 569,53,105 0,667,1182 +chr19_KI270890v1_alt 146988 153369 CA-CS-19_KI270890v1_alt-147503-147608.0[L] 0 - 146988 153369 255,0,0 3 53,105,294 0,515,6087 +chr19_KI270890v1_alt 147503 155251 CA-CS-19_KI270890v1_alt-153075-153369.0[L] 0 - 147503 155251 255,0,0 3 105,294,300 0,5572,7448 +chr19_KI270890v1_alt 15002 17829 CA-CS-19_KI270890v1_alt-16766-17051.0[L] 0 - 15002 17829 255,0,0 3 300,285,36 0,1764,2791 +chr19_KI270890v1_alt 153075 156809 CA-CS-19_KI270890v1_alt-154951-155251.0[L] 0 - 153075 156809 255,0,0 3 294,300,285 0,1876,3449 +chr19_KI270890v1_alt 154951 157615 CA-CS-19_KI270890v1_alt-156524-156809.0[L] 0 - 154951 157615 255,0,0 3 300,285,36 0,1573,2628 +chr19_KI270890v1_alt 156524 158415 CA-CS-19_KI270890v1_alt-157579-157615.0[L] 0 - 156524 158415 255,0,0 3 285,36,84 0,1055,1807 +chr19_KI270890v1_alt 16766 18625 CA-CS-19_KI270890v1_alt-17793-17829.0[L] 0 - 16766 18625 255,0,0 3 285,36,67 0,1027,1792 +chr19_KI270890v1_alt 169423 172769 CA-CS-19_KI270890v1_alt-169928-169979.0[L] 0 - 169423 172769 255,0,0 3 357,51,303 0,505,3043 +chr19_KI270890v1_alt 169928 173321 CA-CS-19_KI270890v1_alt-172466-172769.0[L] 0 - 169928 173321 255,0,0 3 51,303,297 0,2538,3096 +chr19_KI270890v1_alt 172466 173840 CA-CS-19_KI270890v1_alt-173024-173321.0[L] 0 - 172466 173840 255,0,0 3 303,297,310 0,558,1064 +chr19_KI270890v1_alt 173024 174274 CA-CS-19_KI270890v1_alt-173530-173840.0[L] 0 - 173024 174274 255,0,0 3 297,310,285 0,506,965 +chr19_KI270890v1_alt 173530 174960 CA-CS-19_KI270890v1_alt-173989-174274.0[L] 0 - 173530 174960 255,0,0 3 310,285,523 0,459,907 +chr19_KI270890v1_alt 1830 3241 CA-CS-19_KI270890v1_alt-2623-2676.0[L] 0 - 1830 3241 255,0,0 3 694,53,105 0,793,1306 +chr19_KI270890v1_alt 1838 21313 CA-CS-19_KI270890v1_alt-20603-21162.0[L] 0 - 1838 21313 255,0,0 3 126,559,53 0,18765,19422 +chr19_KI270890v1_alt 20494 21880 CA-CS-19_KI270890v1_alt-21260-21313.0[L] 0 - 20494 21880 255,0,0 3 668,53,105 0,766,1281 +chr19_KI270890v1_alt 20603 21880 CA-CS-19_KI270890v1_alt-21260-21313.1[L] 0 - 20603 21880 255,0,0 3 559,53,105 0,657,1172 +chr19_KI270890v1_alt 20947 21880 CA-CS-19_KI270890v1_alt-21260-21313.2[L] 0 - 20947 21880 255,0,0 3 215,53,105 0,313,828 +chr19_KI270890v1_alt 21260 135720 CA-CS-19_KI270890v1_alt-21775-21880.2[L] 0 - 21260 135720 255,0,0 3 53,105,51 0,515,114409 +chr19_KI270890v1_alt 21260 139078 CA-CS-19_KI270890v1_alt-21775-21880.0[L] 0 - 21260 139078 255,0,0 3 53,105,190 0,515,117628 +chr19_KI270890v1_alt 21260 26194 CA-CS-19_KI270890v1_alt-21775-21880.1[L] 0 - 21260 26194 255,0,0 3 53,105,51 0,515,4883 +chr19_KI270890v1_alt 21775 139078 CA-CA-19_KI270890v1_alt-135669-135720.1[L] 0 - 21775 139078 255,0,0 3 105,51,190 0,113894,117113 +chr19_KI270890v1_alt 21775 139182 CA-CS-19_KI270890v1_alt-135669-135720.1[L] 0 - 21775 139182 255,0,0 3 105,51,294 0,113894,117113 +chr19_KI270890v1_alt 21775 139182 CA-CS-19_KI270890v1_alt-138888-139078.0[L] 0 - 21775 139182 255,0,0 3 105,190,82 0,117113,117325 +chr19_KI270890v1_alt 21775 29642 CA-CS-19_KI270890v1_alt-26143-26194.1[L] 0 - 21775 29642 255,0,0 3 105,51,294 0,4368,7573 +chr19_KI270890v1_alt 21775 46097 CA-CS-19_KI270890v1_alt-26143-26194.0[L] 0 - 21775 46097 255,0,0 3 105,51,294 0,4368,24028 +chr19_KI270890v1_alt 26143 108265 CA-CS-19_KI270890v1_alt-45803-46097.0[L] 0 - 26143 108265 255,0,0 3 51,294,300 0,19660,81822 +chr19_KI270890v1_alt 26143 31467 CA-CS-19_KI270890v1_alt-29348-29642.0[L] 0 - 26143 31467 255,0,0 3 51,294,300 0,3205,5024 +chr19_KI270890v1_alt 2623 13423 CA-CS-19_KI270890v1_alt-3136-3241.0[L] 0 - 2623 13423 255,0,0 3 53,105,294 0,513,10506 +chr19_KI270890v1_alt 2623 9965 CA-CS-19_KI270890v1_alt-3136-3241.1[L] 0 - 2623 9965 255,0,0 3 53,105,51 0,513,7291 +chr19_KI270890v1_alt 29348 33951 CA-CS-19_KI270890v1_alt-31167-31467.0[L] 0 - 29348 33951 255,0,0 3 294,300,36 0,1819,4567 +chr19_KI270890v1_alt 31167 34962 CA-CS-19_KI270890v1_alt-33915-33951.0[L] 0 - 31167 34962 255,0,0 3 300,36,47 0,2748,3748 +chr19_KI270890v1_alt 3136 13423 CA-CA-19_KI270890v1_alt-9914-9965.0[L] 0 - 3136 13423 255,0,0 3 105,51,294 0,6778,9993 +chr19_KI270890v1_alt 3136 15302 CA-CS-19_KI270890v1_alt-13129-13423.1[L] 0 - 3136 15302 255,0,0 3 105,294,300 0,9993,11866 +chr19_KI270890v1_alt 33735 35377 CA-CS-19_KI270890v1_alt-33862-34059.0[L] 0 + 33735 35377 255,0,0 3 43,197,469 0,127,1173 +chr19_KI270890v1_alt 33735 35377 CA-CS-19_KI270890v1_alt-33862-34130.0[L] 0 + 33735 35377 255,0,0 3 43,268,469 0,127,1173 +chr19_KI270890v1_alt 33862 35377 AD-AD-19_KI270890v1_alt-34059-34130.0[L] 0 + 33862 35377 255,0,0 3 197,71,469 0,197,1046 +chr19_KI270890v1_alt 36928 38340 CA-CS-19_KI270890v1_alt-37720-37773.0[L] 0 - 36928 38340 255,0,0 3 694,53,105 0,792,1307 +chr19_KI270890v1_alt 37720 42656 CA-CS-19_KI270890v1_alt-38235-38340.0[L] 0 - 37720 42656 255,0,0 3 53,105,51 0,515,4885 +chr19_KI270890v1_alt 38235 46097 CA-CS-19_KI270890v1_alt-42605-42656.0[L] 0 - 38235 46097 255,0,0 3 105,51,294 0,4370,7568 +chr19_KI270890v1_alt 42605 47925 CA-CS-19_KI270890v1_alt-45803-46097.1[L] 0 - 42605 47925 255,0,0 3 51,294,300 0,3198,5020 +chr19_KI270890v1_alt 45803 110794 CA-CS-19_KI270890v1_alt-107965-108265.0[L] 0 - 45803 110794 255,0,0 3 294,300,36 0,62162,64955 +chr19_KI270890v1_alt 45803 50405 CA-CS-19_KI270890v1_alt-47625-47925.0[L] 0 - 45803 50405 255,0,0 3 294,300,36 0,1822,4566 +chr19_KI270890v1_alt 47625 51949 CA-CS-19_KI270890v1_alt-50369-50405.0[L] 0 - 47625 51949 255,0,0 3 300,36,68 0,2744,4256 +chr19_KI270890v1_alt 50189 63743 CA-CS-19_KI270890v1_alt-62459-62656.0[L] 0 + 50189 63743 255,0,0 3 43,197,469 0,12270,13085 +chr19_KI270890v1_alt 53904 54740 CA-CS-19_KI270890v1_alt-54433-54588.0[L] 0 - 53904 54740 255,0,0 3 528,155,52 0,529,784 +chr19_KI270890v1_alt 53905 55308 CA-CS-19_KI270890v1_alt-54688-54741.0[L] 0 - 53905 55308 255,0,0 3 683,53,105 0,783,1298 +chr19_KI270890v1_alt 54433 66692 CA-CS-19_KI270890v1_alt-54688-54740.0[L] 0 - 54433 66692 255,0,0 3 155,52,106 0,255,12153 +chr19_KI270890v1_alt 54688 58124 CA-CS-19_KI270890v1_alt-55203-55308.0[L] 0 - 54688 58124 255,0,0 3 53,105,51 0,515,3385 +chr19_KI270890v1_alt 54688 71023 CA-CS-19_KI270890v1_alt-66586-66692.1[L] 0 - 54688 71023 255,0,0 3 52,106,51 0,11898,16284 +chr19_KI270890v1_alt 55203 60590 CA-CS-19_KI270890v1_alt-58073-58124.0[L] 0 - 55203 60590 255,0,0 3 105,51,294 0,2870,5093 +chr19_KI270890v1_alt 58073 61750 CA-CS-19_KI270890v1_alt-60296-60590.0[L] 0 - 58073 61750 255,0,0 3 51,294,285 0,2223,3392 +chr19_KI270890v1_alt 60296 62548 CA-CS-19_KI270890v1_alt-61465-61750.0[L] 0 - 60296 62548 255,0,0 3 294,285,36 0,1169,2216 +chr19_KI270890v1_alt 61465 63370 CA-CS-19_KI270890v1_alt-62512-62548.0[L] 0 - 61465 63370 255,0,0 3 285,36,89 0,1047,1816 +chr19_KI270890v1_alt 65402 66692 CA-CS-19_KI270890v1_alt-66073-66124.0[L] 0 - 65402 66692 255,0,0 3 573,51,106 0,671,1184 +chr19_KI270890v1_alt 65746 114959 CA-CS-19_KI270890v1_alt-82712-82765.1[L] 0 - 65746 114959 255,0,0 3 229,53,47 0,16966,49166 +chr19_KI270890v1_alt 66073 71023 CA-CS-19_KI270890v1_alt-66586-66692.0[L] 0 - 66073 71023 255,0,0 3 51,106,51 0,513,4899 +chr19_KI270890v1_alt 66586 74487 CA-CS-19_KI270890v1_alt-70972-71023.0[L] 0 - 66586 74487 255,0,0 3 106,51,294 0,4386,7607 +chr19_KI270890v1_alt 70972 76367 CA-CS-19_KI270890v1_alt-74193-74487.0[L] 0 - 70972 76367 255,0,0 3 51,294,300 0,3221,5095 +chr19_KI270890v1_alt 74193 78140 CA-CS-19_KI270890v1_alt-76067-76367.0[L] 0 - 74193 78140 255,0,0 3 294,300,285 0,1874,3662 +chr19_KI270890v1_alt 74193 78920 CA-CS-19_KI270890v1_alt-76067-76367.1[L] 0 - 74193 78920 255,0,0 3 294,300,36 0,1874,4691 +chr19_KI270890v1_alt 74193 79990 CA-CS-19_KI270890v1_alt-76067-76367.2[L] 0 - 74193 79990 255,0,0 3 294,300,71 0,1874,5726 +chr19_KI270890v1_alt 76067 78920 CA-CA-19_KI270890v1_alt-77855-78140.0[L] 0 - 76067 78920 255,0,0 3 300,285,36 0,1788,2817 +chr19_KI270890v1_alt 76067 79990 CA-CA-19_KI270890v1_alt-78884-78920.0[L] 0 - 76067 79990 255,0,0 3 300,36,71 0,2817,3852 +chr19_KI270890v1_alt 77855 79990 CA-CS-19_KI270890v1_alt-78884-78920.0[L] 0 - 77855 79990 255,0,0 3 285,36,71 0,1029,2064 +chr19_KI270890v1_alt 77855 80016 CA-CS-19_KI270890v1_alt-78884-78920.1[L] 0 - 77855 80016 255,0,0 3 285,36,97 0,1029,2064 +chr19_KI270890v1_alt 81937 83331 CA-CS-19_KI270890v1_alt-82712-82764.0[L] 0 - 81937 83331 255,0,0 3 676,52,105 0,775,1289 +chr19_KI270890v1_alt 81937 83331 CA-CS-19_KI270890v1_alt-82712-82765.0[L] 0 - 81937 83331 255,0,0 3 676,53,105 0,775,1289 +chr19_KI270890v1_alt 81937 87625 CA-CS-19_KI270890v1_alt-82712-82765.2[L] 0 - 81937 87625 255,0,0 3 676,53,51 0,775,5637 +chr19_KI270890v1_alt 82712 115014 CA-CS-19_KI270890v1_alt-114912-114959.0[L] 0 - 82712 115014 255,0,0 3 53,47,45 0,32200,32257 +chr19_KI270890v1_alt 82712 83331 AA-AA-19_KI270890v1_alt-82764-82765.0[L] 0 - 82712 83331 255,0,0 3 52,1,105 0,52,514 +chr19_KI270890v1_alt 82712 87625 CA-CA-19_KI270890v1_alt-83226-83331.0[L] 0 - 82712 87625 255,0,0 3 53,105,51 0,514,4862 +chr19_KI270890v1_alt 82712 87625 CA-CS-19_KI270890v1_alt-83226-83331.0[L] 0 - 82712 87625 255,0,0 3 52,105,51 0,514,4862 +chr19_KI270890v1_alt 82712 90507 CA-CS-19_KI270890v1_alt-87574-87625.0[L] 0 - 82712 90507 255,0,0 3 53,51,294 0,4862,7501 +chr19_KI270890v1_alt 83226 90507 CA-CS-19_KI270890v1_alt-87574-87625.1[L] 0 - 83226 90507 255,0,0 3 105,51,294 0,4348,6987 +chr19_KI270890v1_alt 87574 91671 CA-CS-19_KI270890v1_alt-90213-90507.0[L] 0 - 87574 91671 255,0,0 3 51,294,285 0,2639,3812 +chr19_KI270890v1_alt 90213 92573 CA-CS-19_KI270890v1_alt-91386-91671.0[L] 0 - 90213 92573 255,0,0 3 294,285,36 0,1173,2324 +chr19_KI270890v1_alt 91386 92852 CA-CS-19_KI270890v1_alt-92537-92573.0[L] 0 - 91386 92852 255,0,0 3 285,36,80 0,1151,1386 +chr19_KI270890v1_alt 9914 15302 CA-CS-19_KI270890v1_alt-13129-13423.0[L] 0 - 9914 15302 255,0,0 3 51,294,300 0,3215,5088