Mercurial > repos > bioitcore > splicetrap
diff db/hg38v3/parallel/chr19_KI270891v1_alt.aa @ 2:01169764d7ca draft
planemo upload
| author | bioitcore |
|---|---|
| date | Thu, 07 Sep 2017 15:20:40 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/db/hg38v3/parallel/chr19_KI270891v1_alt.aa Thu Sep 07 15:20:40 2017 -0400 @@ -0,0 +1,117 @@ +chr19_KI270891v1_alt 101230 102638 CA-CS-19_KI270891v1_alt-102018-102071.0[L] 0 - 101230 102638 255,0,0 3 690,53,105 0,788,1303 +chr19_KI270891v1_alt 101234 102638 CA-CS-19_KI270891v1_alt-102018-102071.1[L] 0 - 101234 102638 255,0,0 3 686,53,105 0,784,1299 +chr19_KI270891v1_alt 102018 105224 CA-CS-19_KI270891v1_alt-102533-102638.0[L] 0 - 102018 105224 255,0,0 3 53,105,51 0,515,3155 +chr19_KI270891v1_alt 102533 108683 CA-CS-19_KI270891v1_alt-105173-105224.2[L] 0 - 102533 108683 255,0,0 3 105,51,294 0,2640,5856 +chr19_KI270891v1_alt 102533 125320 CA-CS-19_KI270891v1_alt-105173-105224.0[L] 0 - 102533 125320 255,0,0 3 105,51,294 0,2640,22493 +chr19_KI270891v1_alt 105173 110507 CA-CS-19_KI270891v1_alt-108389-108683.0[L] 0 - 105173 110507 255,0,0 3 51,294,299 0,3216,5035 +chr19_KI270891v1_alt 105173 127135 CA-CS-19_KI270891v1_alt-125026-125320.0[L] 0 - 105173 127135 255,0,0 3 51,294,300 0,19853,21662 +chr19_KI270891v1_alt 108389 113001 CA-CS-19_KI270891v1_alt-110208-110507.0[L] 0 - 108389 113001 255,0,0 3 294,299,36 0,1819,4576 +chr19_KI270891v1_alt 110208 114129 CA-CS-19_KI270891v1_alt-112965-113001.2[L] 0 - 110208 114129 255,0,0 3 299,36,71 0,2757,3850 +chr19_KI270891v1_alt 112785 114520 CA-CS-19_KI270891v1_alt-112912-113109.0[L] 0 + 112785 114520 255,0,0 3 43,197,469 0,127,1266 +chr19_KI270891v1_alt 112785 114520 CA-CS-19_KI270891v1_alt-112912-113175.0[L] 0 + 112785 114520 255,0,0 3 43,263,474 0,127,1261 +chr19_KI270891v1_alt 116063 117467 CA-CS-19_KI270891v1_alt-116847-116900.0[L] 0 - 116063 117467 255,0,0 3 686,53,105 0,784,1299 +chr19_KI270891v1_alt 116847 121782 CA-CS-19_KI270891v1_alt-117362-117467.0[L] 0 - 116847 121782 255,0,0 3 53,105,51 0,515,4884 +chr19_KI270891v1_alt 117362 125320 CA-CS-19_KI270891v1_alt-121731-121782.0[L] 0 - 117362 125320 255,0,0 3 105,51,294 0,4369,7664 +chr19_KI270891v1_alt 121731 127135 CA-CS-19_KI270891v1_alt-125026-125320.3[L] 0 - 121731 127135 255,0,0 3 51,294,300 0,3295,5104 +chr19_KI270891v1_alt 125026 129608 CA-CA-19_KI270891v1_alt-126835-127135.0[L] 0 - 125026 129608 255,0,0 3 294,300,36 0,1809,4546 +chr19_KI270891v1_alt 125026 130585 CA-CS-19_KI270891v1_alt-129572-129608.6[L] 0 - 125026 130585 255,0,0 3 294,36,69 0,4546,5490 +chr19_KI270891v1_alt 126835 130579 CA-CS-19_KI270891v1_alt-129572-129608.3[L] 0 - 126835 130579 255,0,0 3 300,36,63 0,2737,3681 +chr19_KI270891v1_alt 126835 130585 CA-CS-19_KI270891v1_alt-129572-129608.0[L] 0 - 126835 130585 255,0,0 3 300,36,69 0,2737,3681 +chr19_KI270891v1_alt 126835 130587 CA-CS-19_KI270891v1_alt-129572-129608.4[L] 0 - 126835 130587 255,0,0 3 300,36,71 0,2737,3681 +chr19_KI270891v1_alt 126835 144565 CA-CS-19_KI270891v1_alt-129572-129608.1[L] 0 - 126835 144565 255,0,0 3 300,36,45 0,2737,17685 +chr19_KI270891v1_alt 126835 144592 CA-CS-19_KI270891v1_alt-129572-129608.5[L] 0 - 126835 144592 255,0,0 3 300,36,72 0,2737,17685 +chr19_KI270891v1_alt 13141 17059 CA-CS-19_KI270891v1_alt-15010-15310.0[L] 0 - 13141 17059 255,0,0 3 294,300,285 0,1869,3633 +chr19_KI270891v1_alt 132556 133840 CA-CS-19_KI270891v1_alt-133220-133273.0[L] 0 - 132556 133840 255,0,0 3 566,53,105 0,664,1179 +chr19_KI270891v1_alt 133220 139601 CA-CS-19_KI270891v1_alt-133735-133840.0[L] 0 - 133220 139601 255,0,0 3 53,105,294 0,515,6087 +chr19_KI270891v1_alt 133735 141479 CA-CS-19_KI270891v1_alt-139307-139601.0[L] 0 - 133735 141479 255,0,0 3 105,294,300 0,5572,7444 +chr19_KI270891v1_alt 139307 143037 CA-CS-19_KI270891v1_alt-141179-141479.0[L] 0 - 139307 143037 255,0,0 3 294,300,285 0,1872,3445 +chr19_KI270891v1_alt 141179 143843 CA-CS-19_KI270891v1_alt-142752-143037.0[L] 0 - 141179 143843 255,0,0 3 300,285,36 0,1573,2628 +chr19_KI270891v1_alt 142752 144604 CA-CS-19_KI270891v1_alt-143807-143843.0[L] 0 - 142752 144604 255,0,0 3 285,36,84 0,1055,1768 +chr19_KI270891v1_alt 15010 17837 CA-CS-19_KI270891v1_alt-16774-17059.0[L] 0 - 15010 17837 255,0,0 3 300,285,36 0,1764,2791 +chr19_KI270891v1_alt 155604 158950 CA-CS-19_KI270891v1_alt-156109-156160.0[L] 0 - 155604 158950 255,0,0 3 357,51,303 0,505,3043 +chr19_KI270891v1_alt 156109 159502 CA-CS-19_KI270891v1_alt-158647-158950.0[L] 0 - 156109 159502 255,0,0 3 51,303,297 0,2538,3096 +chr19_KI270891v1_alt 158647 160021 CA-CS-19_KI270891v1_alt-159205-159502.0[L] 0 - 158647 160021 255,0,0 3 303,297,310 0,558,1064 +chr19_KI270891v1_alt 159205 160455 CA-CS-19_KI270891v1_alt-159711-160021.0[L] 0 - 159205 160455 255,0,0 3 297,310,285 0,506,965 +chr19_KI270891v1_alt 159711 161141 CA-CS-19_KI270891v1_alt-160170-160455.0[L] 0 - 159711 161141 255,0,0 3 310,285,523 0,459,907 +chr19_KI270891v1_alt 16774 18614 CA-CS-19_KI270891v1_alt-17801-17837.0[L] 0 - 16774 18614 255,0,0 3 285,36,67 0,1027,1773 +chr19_KI270891v1_alt 1840 21305 CA-CS-19_KI270891v1_alt-20595-21154.1[L] 0 - 1840 21305 255,0,0 3 135,559,53 0,18755,19412 +chr19_KI270891v1_alt 1841 3252 CA-CS-19_KI270891v1_alt-2634-2687.0[L] 0 - 1841 3252 255,0,0 3 694,53,105 0,793,1306 +chr19_KI270891v1_alt 1961 21264 CA-CS-19_KI270891v1_alt-20595-21154.0[L] 0 - 1961 21264 255,0,0 3 14,559,12 0,18634,19291 +chr19_KI270891v1_alt 20486 21872 CA-CS-19_KI270891v1_alt-21252-21305.1[L] 0 - 20486 21872 255,0,0 3 668,53,105 0,766,1281 +chr19_KI270891v1_alt 20489 21305 AA-AA-19_KI270891v1_alt-21088-21154.0[L] 0 - 20489 21305 255,0,0 3 599,66,53 0,599,763 +chr19_KI270891v1_alt 20489 21872 CA-CS-19_KI270891v1_alt-21252-21305.0[L] 0 - 20489 21872 255,0,0 3 599,53,105 0,763,1278 +chr19_KI270891v1_alt 20489 21872 CA-CS-19_KI270891v1_alt-21252-21305.3[L] 0 - 20489 21872 255,0,0 3 665,53,105 0,763,1278 +chr19_KI270891v1_alt 20595 21304 CA-CS-19_KI270891v1_alt-21252-21264.0[L] 0 - 20595 21304 255,0,0 3 559,12,38 0,657,671 +chr19_KI270891v1_alt 20595 21872 CA-CS-19_KI270891v1_alt-21252-21305.2[L] 0 - 20595 21872 255,0,0 3 559,53,105 0,657,1172 +chr19_KI270891v1_alt 20925 21872 CA-CS-19_KI270891v1_alt-21252-21305.4[L] 0 - 20925 21872 255,0,0 3 229,53,105 0,327,842 +chr19_KI270891v1_alt 20939 21872 CA-CS-19_KI270891v1_alt-21252-21305.5[L] 0 - 20939 21872 255,0,0 3 215,53,105 0,313,828 +chr19_KI270891v1_alt 21252 125320 CA-CS-19_KI270891v1_alt-21767-21872.3[L] 0 - 21252 125320 255,0,0 3 53,105,294 0,515,103774 +chr19_KI270891v1_alt 21252 21305 CA-CS-19_KI270891v1_alt-21266-21304.0[L] 0 - 21252 21305 255,0,0 3 12,38,1 0,14,52 +chr19_KI270891v1_alt 21252 26188 CA-CS-19_KI270891v1_alt-21767-21872.2[L] 0 - 21252 26188 255,0,0 3 53,105,51 0,515,4885 +chr19_KI270891v1_alt 21252 29547 CA-CS-19_KI270891v1_alt-21767-21872.1[L] 0 - 21252 29547 255,0,0 3 53,105,190 0,515,8105 +chr19_KI270891v1_alt 21252 90503 CA-CS-19_KI270891v1_alt-21767-21872.0[L] 0 - 21252 90503 255,0,0 3 53,105,51 0,515,69200 +chr19_KI270891v1_alt 21266 21872 CA-CS-19_KI270891v1_alt-21304-21305.0[L] 0 - 21266 21872 255,0,0 3 38,1,105 0,38,501 +chr19_KI270891v1_alt 21304 44051 CA-CS-19_KI270891v1_alt-21767-21872.4[L] 0 - 21304 44051 255,0,0 3 1,105,51 0,463,22696 +chr19_KI270891v1_alt 21767 125320 CA-CA-19_KI270891v1_alt-26137-26188.0[L] 0 - 21767 125320 255,0,0 3 105,51,294 0,4370,103259 +chr19_KI270891v1_alt 21767 127135 CA-CS-19_KI270891v1_alt-125026-125320.2[L] 0 - 21767 127135 255,0,0 3 105,294,300 0,103259,105068 +chr19_KI270891v1_alt 21767 129608 CA-CS-19_KI270891v1_alt-26137-26188.1[L] 0 - 21767 129608 255,0,0 3 105,51,36 0,4370,107805 +chr19_KI270891v1_alt 21767 29547 CA-CA-19_KI270891v1_alt-26137-26188.1[L] 0 - 21767 29547 255,0,0 3 105,51,190 0,4370,7590 +chr19_KI270891v1_alt 21767 29651 CA-CS-19_KI270891v1_alt-26137-26188.0[L] 0 - 21767 29651 255,0,0 3 105,51,294 0,4370,7590 +chr19_KI270891v1_alt 21767 29651 CA-CS-19_KI270891v1_alt-29357-29547.1[L] 0 - 21767 29651 255,0,0 3 105,190,82 0,7590,7802 +chr19_KI270891v1_alt 21767 47514 CA-CS-19_KI270891v1_alt-44000-44051.1[L] 0 - 21767 47514 255,0,0 3 105,51,294 0,22233,25453 +chr19_KI270891v1_alt 21767 93950 CA-CS-19_KI270891v1_alt-90452-90503.0[L] 0 - 21767 93950 255,0,0 3 105,51,294 0,68685,71889 +chr19_KI270891v1_alt 21767 93953 CA-CS-19_KI270891v1_alt-90452-90503.1[L] 0 - 21767 93953 255,0,0 3 105,51,297 0,68685,71889 +chr19_KI270891v1_alt 26137 127135 CA-CS-19_KI270891v1_alt-125026-125320.1[L] 0 - 26137 127135 255,0,0 3 51,294,300 0,98889,100698 +chr19_KI270891v1_alt 26137 129608 CA-CA-19_KI270891v1_alt-125026-125320.0[L] 0 - 26137 129608 255,0,0 3 51,294,36 0,98889,103435 +chr19_KI270891v1_alt 26137 130585 CA-CS-19_KI270891v1_alt-129572-129608.2[L] 0 - 26137 130585 255,0,0 3 51,36,69 0,103435,104379 +chr19_KI270891v1_alt 26137 29651 CA-CS-19_KI270891v1_alt-29357-29547.0[L] 0 - 26137 29651 255,0,0 3 51,190,82 0,3220,3432 +chr19_KI270891v1_alt 26137 31503 CA-CS-19_KI270891v1_alt-29357-29651.0[L] 0 - 26137 31503 255,0,0 3 51,294,300 0,3220,5066 +chr19_KI270891v1_alt 2634 13435 CA-CS-19_KI270891v1_alt-3147-3252.0[L] 0 - 2634 13435 255,0,0 3 53,105,294 0,513,10507 +chr19_KI270891v1_alt 2634 9977 CA-CS-19_KI270891v1_alt-3147-3252.1[L] 0 - 2634 9977 255,0,0 3 53,105,51 0,513,7292 +chr19_KI270891v1_alt 29357 29651 IR-IR-19_KI270891v1_alt-29547-29569.0[L] 0 - 29357 29651 255,0,0 3 190,22,82 0,190,212 +chr19_KI270891v1_alt 29357 31503 CA-CS-19_KI270891v1_alt-29569-29651.0[L] 0 - 29357 31503 255,0,0 3 190,82,300 0,212,1846 +chr19_KI270891v1_alt 29357 34000 CA-CS-19_KI270891v1_alt-31203-31503.1[L] 0 - 29357 34000 255,0,0 3 294,300,36 0,1846,4607 +chr19_KI270891v1_alt 29569 34000 CA-CS-19_KI270891v1_alt-31203-31503.0[L] 0 - 29569 34000 255,0,0 3 82,300,36 0,1634,4395 +chr19_KI270891v1_alt 31203 36403 CA-CS-19_KI270891v1_alt-33964-34000.0[L] 0 - 31203 36403 255,0,0 3 300,36,123 0,2761,5077 +chr19_KI270891v1_alt 3147 13435 CA-CA-19_KI270891v1_alt-9926-9977.0[L] 0 - 3147 13435 255,0,0 3 105,51,294 0,6779,9994 +chr19_KI270891v1_alt 3147 15310 CA-CS-19_KI270891v1_alt-13141-13435.1[L] 0 - 3147 15310 255,0,0 3 105,294,300 0,9994,11863 +chr19_KI270891v1_alt 38300 39718 CA-CS-19_KI270891v1_alt-39098-39151.0[L] 0 - 38300 39718 255,0,0 3 680,53,105 0,798,1313 +chr19_KI270891v1_alt 39098 44051 CA-CS-19_KI270891v1_alt-39613-39718.0[L] 0 - 39098 44051 255,0,0 3 53,105,51 0,515,4902 +chr19_KI270891v1_alt 39613 47514 CA-CS-19_KI270891v1_alt-44000-44051.0[L] 0 - 39613 47514 255,0,0 3 105,51,294 0,4387,7607 +chr19_KI270891v1_alt 44000 49366 CA-CS-19_KI270891v1_alt-47220-47514.0[L] 0 - 44000 49366 255,0,0 3 51,294,300 0,3220,5066 +chr19_KI270891v1_alt 47220 50764 CA-CS-19_KI270891v1_alt-49066-49366.2[L] 0 - 47220 50764 255,0,0 3 294,300,285 0,1846,3259 +chr19_KI270891v1_alt 47220 51544 CA-CS-19_KI270891v1_alt-49066-49366.1[L] 0 - 47220 51544 255,0,0 3 294,300,36 0,1846,4288 +chr19_KI270891v1_alt 47220 52618 CA-CS-19_KI270891v1_alt-49066-49366.0[L] 0 - 47220 52618 255,0,0 3 294,300,71 0,1846,5327 +chr19_KI270891v1_alt 49066 51544 CA-CA-19_KI270891v1_alt-50479-50764.0[L] 0 - 49066 51544 255,0,0 3 300,285,36 0,1413,2442 +chr19_KI270891v1_alt 49066 52618 CA-CA-19_KI270891v1_alt-51508-51544.0[L] 0 - 49066 52618 255,0,0 3 300,36,71 0,2442,3481 +chr19_KI270891v1_alt 50479 52618 CA-CS-19_KI270891v1_alt-51508-51544.1[L] 0 - 50479 52618 255,0,0 3 285,36,71 0,1029,2068 +chr19_KI270891v1_alt 50479 52644 CA-CS-19_KI270891v1_alt-51508-51544.0[L] 0 - 50479 52644 255,0,0 3 285,36,97 0,1029,2068 +chr19_KI270891v1_alt 54565 55959 CA-CS-19_KI270891v1_alt-55340-55392.0[L] 0 - 54565 55959 255,0,0 3 676,52,105 0,775,1289 +chr19_KI270891v1_alt 54565 55959 CA-CS-19_KI270891v1_alt-55340-55393.0[L] 0 - 54565 55959 255,0,0 3 676,53,105 0,775,1289 +chr19_KI270891v1_alt 54565 60252 CA-CS-19_KI270891v1_alt-55340-55393.1[L] 0 - 54565 60252 255,0,0 3 676,53,51 0,775,5636 +chr19_KI270891v1_alt 55340 55959 AA-AA-19_KI270891v1_alt-55392-55393.0[L] 0 - 55340 55959 255,0,0 3 52,1,105 0,52,514 +chr19_KI270891v1_alt 55340 60252 CA-CA-19_KI270891v1_alt-55854-55959.0[L] 0 - 55340 60252 255,0,0 3 53,105,51 0,514,4861 +chr19_KI270891v1_alt 55340 60252 CA-CS-19_KI270891v1_alt-55854-55959.0[L] 0 - 55340 60252 255,0,0 3 52,105,51 0,514,4861 +chr19_KI270891v1_alt 55340 63141 CA-CS-19_KI270891v1_alt-60201-60252.0[L] 0 - 55340 63141 255,0,0 3 53,51,294 0,4861,7507 +chr19_KI270891v1_alt 55854 63141 CA-CS-19_KI270891v1_alt-60201-60252.1[L] 0 - 55854 63141 255,0,0 3 105,51,294 0,4347,6993 +chr19_KI270891v1_alt 60201 64299 CA-CS-19_KI270891v1_alt-62847-63141.0[L] 0 - 60201 64299 255,0,0 3 51,294,285 0,2646,3813 +chr19_KI270891v1_alt 62847 65235 CA-CS-19_KI270891v1_alt-64014-64299.0[L] 0 - 62847 65235 255,0,0 3 294,285,36 0,1167,2352 +chr19_KI270891v1_alt 64014 65514 CA-CS-19_KI270891v1_alt-65199-65235.0[L] 0 - 64014 65514 255,0,0 3 285,36,80 0,1185,1420 +chr19_KI270891v1_alt 84788 86193 CA-CS-19_KI270891v1_alt-85576-85629.0[L] 0 - 84788 86193 255,0,0 3 690,53,102 0,788,1303 +chr19_KI270891v1_alt 84790 86193 CA-CS-19_KI270891v1_alt-85576-85629.1[L] 0 - 84790 86193 255,0,0 3 688,53,102 0,786,1301 +chr19_KI270891v1_alt 85576 105224 CA-CS-19_KI270891v1_alt-86091-86193.0[L] 0 - 85576 105224 255,0,0 3 53,102,51 0,515,19597 +chr19_KI270891v1_alt 85576 90503 CA-CS-19_KI270891v1_alt-86091-86193.1[L] 0 - 85576 90503 255,0,0 3 53,102,51 0,515,4876 +chr19_KI270891v1_alt 86091 125320 CA-CS-19_KI270891v1_alt-105173-105224.1[L] 0 - 86091 125320 255,0,0 3 102,51,294 0,19082,38935 +chr19_KI270891v1_alt 86091 93950 CA-CS-19_KI270891v1_alt-90452-90503.2[L] 0 - 86091 93950 255,0,0 3 102,51,294 0,4361,7565 +chr19_KI270891v1_alt 90452 95782 CA-CS-19_KI270891v1_alt-93656-93950.0[L] 0 - 90452 95782 255,0,0 3 51,294,300 0,3204,5030 +chr19_KI270891v1_alt 90452 95782 CA-CS-19_KI270891v1_alt-93656-93953.0[L] 0 - 90452 95782 255,0,0 3 51,297,297 0,3204,5033 +chr19_KI270891v1_alt 93656 113001 CA-CS-19_KI270891v1_alt-95482-95782.0[L] 0 - 93656 113001 255,0,0 3 294,300,36 0,1826,19309 +chr19_KI270891v1_alt 93656 113001 CA-CS-19_KI270891v1_alt-95485-95782.0[L] 0 - 93656 113001 255,0,0 3 297,297,36 0,1829,19309 +chr19_KI270891v1_alt 93656 98266 CA-CS-19_KI270891v1_alt-95482-95782.1[L] 0 - 93656 98266 255,0,0 3 294,300,36 0,1826,4574 +chr19_KI270891v1_alt 95482 114105 CA-CS-19_KI270891v1_alt-112965-113001.0[L] 0 - 95482 114105 255,0,0 3 300,36,47 0,17483,18576 +chr19_KI270891v1_alt 95482 99302 CA-CS-19_KI270891v1_alt-98230-98266.0[L] 0 - 95482 99302 255,0,0 3 300,36,72 0,2748,3748 +chr19_KI270891v1_alt 95485 144587 CA-CS-19_KI270891v1_alt-112965-113001.1[L] 0 - 95485 144587 255,0,0 3 297,36,67 0,17480,49035 +chr19_KI270891v1_alt 98050 99693 CA-CS-19_KI270891v1_alt-98177-98374.0[L] 0 + 98050 99693 255,0,0 3 43,197,470 0,127,1173 +chr19_KI270891v1_alt 98050 99693 CA-CS-19_KI270891v1_alt-98177-98445.0[L] 0 + 98050 99693 255,0,0 3 43,268,470 0,127,1173 +chr19_KI270891v1_alt 98177 99693 AD-AD-19_KI270891v1_alt-98374-98445.0[L] 0 + 98177 99693 255,0,0 3 197,71,470 0,197,1046 +chr19_KI270891v1_alt 9926 15310 CA-CS-19_KI270891v1_alt-13141-13435.0[L] 0 - 9926 15310 255,0,0 3 51,294,300 0,3215,5084