Mercurial > repos > bioitcore > splicetrap
diff db/hg38v3/parallel/chr19_KI270919v1_alt.aa @ 2:01169764d7ca draft
planemo upload
| author | bioitcore |
|---|---|
| date | Thu, 07 Sep 2017 15:20:40 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/db/hg38v3/parallel/chr19_KI270919v1_alt.aa Thu Sep 07 15:20:40 2017 -0400 @@ -0,0 +1,113 @@ +chr19_KI270919v1_alt 101193 102601 CA-CS-19_KI270919v1_alt-101981-102034.1[L] 0 - 101193 102601 255,0,0 3 690,53,105 0,788,1303 +chr19_KI270919v1_alt 101197 102601 CA-CS-19_KI270919v1_alt-101981-102034.0[L] 0 - 101197 102601 255,0,0 3 686,53,105 0,784,1299 +chr19_KI270919v1_alt 101981 105187 CA-CS-19_KI270919v1_alt-102496-102601.0[L] 0 - 101981 105187 255,0,0 3 53,105,51 0,515,3155 +chr19_KI270919v1_alt 102496 108646 CA-CS-19_KI270919v1_alt-105136-105187.1[L] 0 - 102496 108646 255,0,0 3 105,51,294 0,2640,5856 +chr19_KI270919v1_alt 102496 125283 CA-CS-19_KI270919v1_alt-105136-105187.2[L] 0 - 102496 125283 255,0,0 3 105,51,294 0,2640,22493 +chr19_KI270919v1_alt 105136 110470 CA-CS-19_KI270919v1_alt-108352-108646.0[L] 0 - 105136 110470 255,0,0 3 51,294,299 0,3216,5035 +chr19_KI270919v1_alt 105136 127098 CA-CS-19_KI270919v1_alt-124989-125283.3[L] 0 - 105136 127098 255,0,0 3 51,294,300 0,19853,21662 +chr19_KI270919v1_alt 108352 112964 CA-CS-19_KI270919v1_alt-110171-110470.0[L] 0 - 108352 112964 255,0,0 3 294,299,36 0,1819,4576 +chr19_KI270919v1_alt 110171 114092 CA-CS-19_KI270919v1_alt-112928-112964.0[L] 0 - 110171 114092 255,0,0 3 299,36,71 0,2757,3850 +chr19_KI270919v1_alt 112748 114483 CA-CS-19_KI270919v1_alt-112875-113072.0[L] 0 + 112748 114483 255,0,0 3 43,197,469 0,127,1266 +chr19_KI270919v1_alt 116025 117429 CA-CS-19_KI270919v1_alt-116809-116862.0[L] 0 - 116025 117429 255,0,0 3 686,53,105 0,784,1299 +chr19_KI270919v1_alt 116809 121743 CA-CS-19_KI270919v1_alt-117324-117429.0[L] 0 - 116809 121743 255,0,0 3 53,105,51 0,515,4883 +chr19_KI270919v1_alt 117324 125283 CA-CS-19_KI270919v1_alt-121692-121743.0[L] 0 - 117324 125283 255,0,0 3 105,51,294 0,4368,7665 +chr19_KI270919v1_alt 121692 127098 CA-CS-19_KI270919v1_alt-124989-125283.0[L] 0 - 121692 127098 255,0,0 3 51,294,300 0,3297,5106 +chr19_KI270919v1_alt 124989 129571 CA-CA-19_KI270919v1_alt-126798-127098.0[L] 0 - 124989 129571 255,0,0 3 294,300,36 0,1809,4546 +chr19_KI270919v1_alt 124989 130567 CA-CS-19_KI270919v1_alt-129535-129571.2[L] 0 - 124989 130567 255,0,0 3 294,36,69 0,4546,5509 +chr19_KI270919v1_alt 126798 130561 CA-CS-19_KI270919v1_alt-129535-129571.0[L] 0 - 126798 130561 255,0,0 3 300,36,63 0,2737,3700 +chr19_KI270919v1_alt 126798 130567 CA-CS-19_KI270919v1_alt-129535-129571.5[L] 0 - 126798 130567 255,0,0 3 300,36,69 0,2737,3700 +chr19_KI270919v1_alt 126798 130569 CA-CS-19_KI270919v1_alt-129535-129571.1[L] 0 - 126798 130569 255,0,0 3 300,36,71 0,2737,3700 +chr19_KI270919v1_alt 126798 144592 CA-CS-19_KI270919v1_alt-129535-129571.4[L] 0 - 126798 144592 255,0,0 3 300,36,45 0,2737,17749 +chr19_KI270919v1_alt 126798 144619 CA-CS-19_KI270919v1_alt-129535-129571.3[L] 0 - 126798 144619 255,0,0 3 300,36,72 0,2737,17749 +chr19_KI270919v1_alt 13143 17065 CA-CS-19_KI270919v1_alt-15016-15316.0[L] 0 - 13143 17065 255,0,0 3 294,300,285 0,1873,3637 +chr19_KI270919v1_alt 132541 133825 CA-CS-19_KI270919v1_alt-133205-133258.0[L] 0 - 132541 133825 255,0,0 3 566,53,105 0,664,1179 +chr19_KI270919v1_alt 133205 139585 CA-CS-19_KI270919v1_alt-133720-133825.0[L] 0 - 133205 139585 255,0,0 3 53,105,294 0,515,6086 +chr19_KI270919v1_alt 133720 141467 CA-CS-19_KI270919v1_alt-139291-139585.0[L] 0 - 133720 141467 255,0,0 3 105,294,300 0,5571,7447 +chr19_KI270919v1_alt 139291 143025 CA-CS-19_KI270919v1_alt-141167-141467.0[L] 0 - 139291 143025 255,0,0 3 294,300,285 0,1876,3449 +chr19_KI270919v1_alt 141167 143831 CA-CS-19_KI270919v1_alt-142740-143025.0[L] 0 - 141167 143831 255,0,0 3 300,285,36 0,1573,2628 +chr19_KI270919v1_alt 142740 144631 CA-CS-19_KI270919v1_alt-143795-143831.0[L] 0 - 142740 144631 255,0,0 3 285,36,84 0,1055,1807 +chr19_KI270919v1_alt 15016 17843 CA-CS-19_KI270919v1_alt-16780-17065.0[L] 0 - 15016 17843 255,0,0 3 300,285,36 0,1764,2791 +chr19_KI270919v1_alt 155625 158971 CA-CS-19_KI270919v1_alt-156130-156181.0[L] 0 - 155625 158971 255,0,0 3 357,51,303 0,505,3043 +chr19_KI270919v1_alt 156130 159523 CA-CS-19_KI270919v1_alt-158668-158971.0[L] 0 - 156130 159523 255,0,0 3 51,303,297 0,2538,3096 +chr19_KI270919v1_alt 158668 160042 CA-CS-19_KI270919v1_alt-159226-159523.0[L] 0 - 158668 160042 255,0,0 3 303,297,310 0,558,1064 +chr19_KI270919v1_alt 159226 160476 CA-CS-19_KI270919v1_alt-159732-160042.0[L] 0 - 159226 160476 255,0,0 3 297,310,285 0,506,965 +chr19_KI270919v1_alt 159732 161162 CA-CS-19_KI270919v1_alt-160191-160476.0[L] 0 - 159732 161162 255,0,0 3 310,285,523 0,459,907 +chr19_KI270919v1_alt 16780 18639 CA-CS-19_KI270919v1_alt-17807-17843.0[L] 0 - 16780 18639 255,0,0 3 285,36,67 0,1027,1792 +chr19_KI270919v1_alt 1841 21327 CA-CS-19_KI270919v1_alt-20617-21176.0[L] 0 - 1841 21327 255,0,0 3 135,559,53 0,18776,19433 +chr19_KI270919v1_alt 1842 3253 CA-CS-19_KI270919v1_alt-2635-2688.0[L] 0 - 1842 3253 255,0,0 3 694,53,105 0,793,1306 +chr19_KI270919v1_alt 1962 21286 CA-CS-19_KI270919v1_alt-20617-21176.1[L] 0 - 1962 21286 255,0,0 3 14,559,12 0,18655,19312 +chr19_KI270919v1_alt 20508 21894 CA-CS-19_KI270919v1_alt-21274-21327.3[L] 0 - 20508 21894 255,0,0 3 668,53,105 0,766,1281 +chr19_KI270919v1_alt 20511 21327 AA-AA-19_KI270919v1_alt-21110-21176.0[L] 0 - 20511 21327 255,0,0 3 599,66,53 0,599,763 +chr19_KI270919v1_alt 20511 21894 CA-CS-19_KI270919v1_alt-21274-21327.1[L] 0 - 20511 21894 255,0,0 3 665,53,105 0,763,1278 +chr19_KI270919v1_alt 20511 21894 CA-CS-19_KI270919v1_alt-21274-21327.2[L] 0 - 20511 21894 255,0,0 3 599,53,105 0,763,1278 +chr19_KI270919v1_alt 20617 21326 CA-CS-19_KI270919v1_alt-21274-21286.0[L] 0 - 20617 21326 255,0,0 3 559,12,38 0,657,671 +chr19_KI270919v1_alt 20617 21894 CA-CS-19_KI270919v1_alt-21274-21327.4[L] 0 - 20617 21894 255,0,0 3 559,53,105 0,657,1172 +chr19_KI270919v1_alt 20947 21894 CA-CS-19_KI270919v1_alt-21274-21327.5[L] 0 - 20947 21894 255,0,0 3 229,53,105 0,327,842 +chr19_KI270919v1_alt 20961 21894 CA-CS-19_KI270919v1_alt-21274-21327.0[L] 0 - 20961 21894 255,0,0 3 215,53,105 0,313,828 +chr19_KI270919v1_alt 21274 125283 CA-CS-19_KI270919v1_alt-21789-21894.0[L] 0 - 21274 125283 255,0,0 3 53,105,294 0,515,103715 +chr19_KI270919v1_alt 21274 21327 CA-CS-19_KI270919v1_alt-21288-21326.0[L] 0 - 21274 21327 255,0,0 3 12,38,1 0,14,52 +chr19_KI270919v1_alt 21274 26210 CA-CS-19_KI270919v1_alt-21789-21894.3[L] 0 - 21274 26210 255,0,0 3 53,105,51 0,515,4885 +chr19_KI270919v1_alt 21274 29650 CA-CS-19_KI270919v1_alt-21789-21894.1[L] 0 - 21274 29650 255,0,0 3 53,105,272 0,515,8104 +chr19_KI270919v1_alt 21274 90466 CA-CS-19_KI270919v1_alt-21789-21894.2[L] 0 - 21274 90466 255,0,0 3 53,105,51 0,515,69141 +chr19_KI270919v1_alt 21288 21894 CA-CS-19_KI270919v1_alt-21326-21327.0[L] 0 - 21288 21894 255,0,0 3 38,1,105 0,38,501 +chr19_KI270919v1_alt 21326 44050 CA-CS-19_KI270919v1_alt-21789-21894.4[L] 0 - 21326 44050 255,0,0 3 1,105,51 0,463,22673 +chr19_KI270919v1_alt 21789 125283 CA-CA-19_KI270919v1_alt-26159-26210.1[L] 0 - 21789 125283 255,0,0 3 105,51,294 0,4370,103200 +chr19_KI270919v1_alt 21789 127098 CA-CS-19_KI270919v1_alt-124989-125283.1[L] 0 - 21789 127098 255,0,0 3 105,294,300 0,103200,105009 +chr19_KI270919v1_alt 21789 129571 CA-CS-19_KI270919v1_alt-26159-26210.0[L] 0 - 21789 129571 255,0,0 3 105,51,36 0,4370,107746 +chr19_KI270919v1_alt 21789 29650 CA-CA-19_KI270919v1_alt-26159-26210.0[L] 0 - 21789 29650 255,0,0 3 105,51,272 0,4370,7589 +chr19_KI270919v1_alt 21789 31502 CA-CS-19_KI270919v1_alt-29378-29650.0[L] 0 - 21789 31502 255,0,0 3 105,272,300 0,7589,9413 +chr19_KI270919v1_alt 21789 47513 CA-CS-19_KI270919v1_alt-43999-44050.1[L] 0 - 21789 47513 255,0,0 3 105,51,294 0,22210,25430 +chr19_KI270919v1_alt 21789 93913 CA-CS-19_KI270919v1_alt-90415-90466.0[L] 0 - 21789 93913 255,0,0 3 105,51,294 0,68626,71830 +chr19_KI270919v1_alt 21789 93916 CA-CS-19_KI270919v1_alt-90415-90466.2[L] 0 - 21789 93916 255,0,0 3 105,51,297 0,68626,71830 +chr19_KI270919v1_alt 26159 127098 CA-CS-19_KI270919v1_alt-124989-125283.2[L] 0 - 26159 127098 255,0,0 3 51,294,300 0,98830,100639 +chr19_KI270919v1_alt 26159 129571 CA-CA-19_KI270919v1_alt-124989-125283.0[L] 0 - 26159 129571 255,0,0 3 51,294,36 0,98830,103376 +chr19_KI270919v1_alt 26159 130567 CA-CS-19_KI270919v1_alt-129535-129571.6[L] 0 - 26159 130567 255,0,0 3 51,36,69 0,103376,104339 +chr19_KI270919v1_alt 26159 31502 CA-CS-19_KI270919v1_alt-29378-29650.1[L] 0 - 26159 31502 255,0,0 3 51,272,300 0,3219,5043 +chr19_KI270919v1_alt 2635 13437 CA-CS-19_KI270919v1_alt-3148-3253.0[L] 0 - 2635 13437 255,0,0 3 53,105,294 0,513,10508 +chr19_KI270919v1_alt 2635 9978 CA-CS-19_KI270919v1_alt-3148-3253.1[L] 0 - 2635 9978 255,0,0 3 53,105,51 0,513,7292 +chr19_KI270919v1_alt 29378 33999 CA-CS-19_KI270919v1_alt-31202-31502.0[L] 0 - 29378 33999 255,0,0 3 272,300,36 0,1824,4585 +chr19_KI270919v1_alt 31202 36402 CA-CS-19_KI270919v1_alt-33963-33999.0[L] 0 - 31202 36402 255,0,0 3 300,36,123 0,2761,5077 +chr19_KI270919v1_alt 3148 13437 CA-CA-19_KI270919v1_alt-9927-9978.0[L] 0 - 3148 13437 255,0,0 3 105,51,294 0,6779,9995 +chr19_KI270919v1_alt 3148 15316 CA-CS-19_KI270919v1_alt-13143-13437.0[L] 0 - 3148 15316 255,0,0 3 105,294,300 0,9995,11868 +chr19_KI270919v1_alt 33785 52953 CA-CS-19_KI270919v1_alt-33910-34107.0[L] 0 + 33785 52953 255,0,0 3 41,197,417 0,125,18751 +chr19_KI270919v1_alt 33785 52953 CA-CS-19_KI270919v1_alt-33910-34178.0[L] 0 + 33785 52953 255,0,0 3 41,268,417 0,125,18751 +chr19_KI270919v1_alt 33910 52953 AD-AD-19_KI270919v1_alt-34107-34178.0[L] 0 + 33910 52953 255,0,0 3 197,71,417 0,197,18626 +chr19_KI270919v1_alt 33910 83209 CA-CS-19_KI270919v1_alt-52536-52953.0[L] 0 + 33910 83209 255,0,0 3 268,417,52 0,18626,49247 +chr19_KI270919v1_alt 33910 83209 CA-CS-19_KI270919v1_alt-52536-52953.1[L] 0 + 33910 83209 255,0,0 3 197,417,52 0,18626,49247 +chr19_KI270919v1_alt 38299 39717 CA-CS-19_KI270919v1_alt-39097-39150.0[L] 0 - 38299 39717 255,0,0 3 680,53,105 0,798,1313 +chr19_KI270919v1_alt 39097 44050 CA-CS-19_KI270919v1_alt-39612-39717.0[L] 0 - 39097 44050 255,0,0 3 53,105,51 0,515,4902 +chr19_KI270919v1_alt 39612 47513 CA-CS-19_KI270919v1_alt-43999-44050.0[L] 0 - 39612 47513 255,0,0 3 105,51,294 0,4387,7607 +chr19_KI270919v1_alt 43999 49365 CA-CS-19_KI270919v1_alt-47219-47513.0[L] 0 - 43999 49365 255,0,0 3 51,294,300 0,3220,5066 +chr19_KI270919v1_alt 47219 50763 CA-CS-19_KI270919v1_alt-49065-49365.2[L] 0 - 47219 50763 255,0,0 3 294,300,285 0,1846,3259 +chr19_KI270919v1_alt 47219 51544 CA-CS-19_KI270919v1_alt-49065-49365.0[L] 0 - 47219 51544 255,0,0 3 294,300,36 0,1846,4289 +chr19_KI270919v1_alt 47219 52614 CA-CS-19_KI270919v1_alt-49065-49365.1[L] 0 - 47219 52614 255,0,0 3 294,300,71 0,1846,5324 +chr19_KI270919v1_alt 49065 51544 CA-CA-19_KI270919v1_alt-50478-50763.0[L] 0 - 49065 51544 255,0,0 3 300,285,36 0,1413,2443 +chr19_KI270919v1_alt 49065 52614 CA-CA-19_KI270919v1_alt-51508-51544.0[L] 0 - 49065 52614 255,0,0 3 300,36,71 0,2443,3478 +chr19_KI270919v1_alt 50478 52614 CA-CS-19_KI270919v1_alt-51508-51544.1[L] 0 - 50478 52614 255,0,0 3 285,36,71 0,1030,2065 +chr19_KI270919v1_alt 50478 52640 CA-CS-19_KI270919v1_alt-51508-51544.0[L] 0 - 50478 52640 255,0,0 3 285,36,97 0,1030,2065 +chr19_KI270919v1_alt 54560 55953 CA-CS-19_KI270919v1_alt-55335-55388.0[L] 0 - 54560 55953 255,0,0 3 676,53,104 0,775,1289 +chr19_KI270919v1_alt 54560 60245 CA-CS-19_KI270919v1_alt-55335-55388.1[L] 0 - 54560 60245 255,0,0 3 676,53,51 0,775,5634 +chr19_KI270919v1_alt 55335 60245 CA-CA-19_KI270919v1_alt-55849-55953.0[L] 0 - 55335 60245 255,0,0 3 53,104,51 0,514,4859 +chr19_KI270919v1_alt 55335 63127 CA-CS-19_KI270919v1_alt-60194-60245.0[L] 0 - 55335 63127 255,0,0 3 53,51,294 0,4859,7498 +chr19_KI270919v1_alt 55849 63127 CA-CS-19_KI270919v1_alt-60194-60245.1[L] 0 - 55849 63127 255,0,0 3 104,51,294 0,4345,6984 +chr19_KI270919v1_alt 60194 64285 CA-CS-19_KI270919v1_alt-62833-63127.0[L] 0 - 60194 64285 255,0,0 3 51,294,285 0,2639,3806 +chr19_KI270919v1_alt 62833 65187 CA-CS-19_KI270919v1_alt-64000-64285.0[L] 0 - 62833 65187 255,0,0 3 294,285,36 0,1167,2318 +chr19_KI270919v1_alt 64000 65466 CA-CS-19_KI270919v1_alt-65151-65187.0[L] 0 - 64000 65466 255,0,0 3 285,36,80 0,1151,1386 +chr19_KI270919v1_alt 84751 86156 CA-CS-19_KI270919v1_alt-85539-85592.0[L] 0 - 84751 86156 255,0,0 3 690,53,102 0,788,1303 +chr19_KI270919v1_alt 84753 86156 CA-CS-19_KI270919v1_alt-85539-85592.1[L] 0 - 84753 86156 255,0,0 3 688,53,102 0,786,1301 +chr19_KI270919v1_alt 85539 105187 CA-CS-19_KI270919v1_alt-86054-86156.0[L] 0 - 85539 105187 255,0,0 3 53,102,51 0,515,19597 +chr19_KI270919v1_alt 85539 90466 CA-CS-19_KI270919v1_alt-86054-86156.1[L] 0 - 85539 90466 255,0,0 3 53,102,51 0,515,4876 +chr19_KI270919v1_alt 86054 125283 CA-CS-19_KI270919v1_alt-105136-105187.0[L] 0 - 86054 125283 255,0,0 3 102,51,294 0,19082,38935 +chr19_KI270919v1_alt 86054 93913 CA-CS-19_KI270919v1_alt-90415-90466.1[L] 0 - 86054 93913 255,0,0 3 102,51,294 0,4361,7565 +chr19_KI270919v1_alt 90415 95745 CA-CS-19_KI270919v1_alt-93619-93913.0[L] 0 - 90415 95745 255,0,0 3 51,294,300 0,3204,5030 +chr19_KI270919v1_alt 90415 95745 CA-CS-19_KI270919v1_alt-93619-93916.0[L] 0 - 90415 95745 255,0,0 3 51,297,297 0,3204,5033 +chr19_KI270919v1_alt 93619 112964 CA-CS-19_KI270919v1_alt-95445-95745.0[L] 0 - 93619 112964 255,0,0 3 294,300,36 0,1826,19309 +chr19_KI270919v1_alt 93619 112964 CA-CS-19_KI270919v1_alt-95448-95745.0[L] 0 - 93619 112964 255,0,0 3 297,297,36 0,1829,19309 +chr19_KI270919v1_alt 93619 98229 CA-CS-19_KI270919v1_alt-95445-95745.1[L] 0 - 93619 98229 255,0,0 3 294,300,36 0,1826,4574 +chr19_KI270919v1_alt 95445 114068 CA-CS-19_KI270919v1_alt-112928-112964.1[L] 0 - 95445 114068 255,0,0 3 300,36,47 0,17483,18576 +chr19_KI270919v1_alt 95445 99265 CA-CS-19_KI270919v1_alt-98193-98229.0[L] 0 - 95445 99265 255,0,0 3 300,36,72 0,2748,3748 +chr19_KI270919v1_alt 95448 144614 CA-CS-19_KI270919v1_alt-112928-112964.2[L] 0 - 95448 144614 255,0,0 3 297,36,67 0,17480,49099 +chr19_KI270919v1_alt 98013 99656 CA-CS-19_KI270919v1_alt-98140-98337.0[L] 0 + 98013 99656 255,0,0 3 43,197,470 0,127,1173 +chr19_KI270919v1_alt 98013 99656 CA-CS-19_KI270919v1_alt-98140-98408.0[L] 0 + 98013 99656 255,0,0 3 43,268,470 0,127,1173 +chr19_KI270919v1_alt 98140 99656 AD-AD-19_KI270919v1_alt-98337-98408.0[L] 0 + 98140 99656 255,0,0 3 197,71,470 0,197,1046 +chr19_KI270919v1_alt 9927 15316 CA-CS-19_KI270919v1_alt-13143-13437.1[L] 0 - 9927 15316 255,0,0 3 51,294,300 0,3216,5089
