Mercurial > repos > bioitcore > splicetrap
view db/hg38v3/parallel/chr1.aa @ 2:01169764d7ca draft
planemo upload
| author | bioitcore |
|---|---|
| date | Thu, 07 Sep 2017 15:20:40 -0400 |
| parents | |
| children |
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chr1 100007033 100015420 CA-CS-1-100011364-100011533.0[L] 0 + 100007033 100015420 255,0,0 3 123,169,119 0,4331,8268 chr1 100007033 100026978 CA-CS-1-100011364-100011533.1[L] 0 + 100007033 100026978 255,0,0 3 123,169,4593 0,4331,15352 chr1 100011364 100017815 CA-CS-1-100015301-100015420.0[L] 0 + 100011364 100017815 255,0,0 3 169,119,134 0,3937,6317 chr1 100015301 100026978 CA-CS-1-100017681-100017815.0[L] 0 + 100015301 100026978 255,0,0 3 119,134,4593 0,2380,7084 chr1 100038232 100058728 CA-CS-1-100049908-100050004.0[L] 0 + 100038232 100058728 255,0,0 3 84,96,63 0,11676,20433 chr1 10004092 10008274 CA-CS-1-10007569-10007748.1[L] 0 + 10004092 10008274 255,0,0 3 215,179,102 0,3477,4080 chr1 100049908 100060005 CA-CS-1-100058665-100058728.0[L] 0 + 100049908 100060005 255,0,0 3 96,63,128 0,8757,9969 chr1 100058665 100061949 CA-CS-1-100059877-100060005.0[L] 0 + 100058665 100061949 255,0,0 3 63,128,115 0,1212,3169 chr1 100059877 100068195 CA-CS-1-100061834-100061949.0[L] 0 + 100059877 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chr1 107770635 107777296 CA-CS-1-107772734-107772843.0[L] 0 - 107770635 107777296 255,0,0 3 93,109,66 0,2099,6595 chr1 107772734 107779492 CA-CS-1-107777230-107777296.0[L] 0 - 107772734 107779492 255,0,0 3 109,66,59 0,4496,6699 chr1 107777230 107875017 CA-CS-1-107779433-107779492.0[L] 0 - 107777230 107875017 255,0,0 3 66,59,117 0,2203,97670 chr1 107779433 107964923 CA-CS-1-107874900-107875017.0[L] 0 - 107779433 107964923 255,0,0 3 59,117,258 0,95467,185232 chr1 107964442 107994607 CA-CS-1-107993504-107993635.0[L] 0 + 107964442 107994607 255,0,0 3 62,131,426 0,29062,29739 chr1 108134721 108143710 CA-CS-1-108139057-108139208.0[L] 0 - 108134721 108143710 255,0,0 3 2116,151,168 0,4336,8821 chr1 108139057 108148386 CA-CS-1-108143542-108143710.0[L] 0 - 108139057 108148386 255,0,0 3 151,168,108 0,4485,9221 chr1 108143542 108155135 CA-CS-1-108148278-108148386.0[L] 0 - 108143542 108155135 255,0,0 3 168,108,153 0,4736,11440 chr1 108148278 108157620 CA-CS-1-108154982-108155135.0[L] 0 - 108148278 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108223340 108229156 255,0,0 3 406,215,237 0,3338,5579 chr1 108226678 108232428 CA-CS-1-108228919-108229156.0[L] 0 - 108226678 108232428 255,0,0 3 215,237,173 0,2241,5577 chr1 108228919 108233211 CA-CS-1-108232255-108232428.0[L] 0 - 108228919 108233211 255,0,0 3 237,173,52 0,3336,4240 chr1 108232255 108234411 CA-CS-1-108233159-108233211.0[L] 0 - 108232255 108234411 255,0,0 3 173,52,170 0,904,1986 chr1 108233159 108235287 CA-CS-1-108234241-108234411.0[L] 0 - 108233159 108235287 255,0,0 3 52,170,52 0,1082,2076 chr1 108234241 108236409 CA-CS-1-108235235-108235287.0[L] 0 - 108234241 108236409 255,0,0 3 170,52,140 0,994,2028 chr1 108235235 108237338 CA-CS-1-108236269-108236409.0[L] 0 - 108235235 108237338 255,0,0 3 52,140,52 0,1034,2051 chr1 108236269 108238959 CA-CS-1-108237286-108237338.0[L] 0 - 108236269 108238959 255,0,0 3 140,52,212 0,1017,2478 chr1 108237286 108239906 CA-CS-1-108238747-108238959.0[L] 0 - 108237286 108239906 255,0,0 3 52,212,79 0,1461,2541 chr1 108238747 108241164 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chr1 108459057 108461184 CA-CS-1-108459932-108460102.0[L] 0 + 108459057 108461184 255,0,0 3 52,170,52 0,875,2075 chr1 108459932 108462088 CA-CS-1-108461132-108461184.0[L] 0 + 108459932 108462088 255,0,0 3 170,52,173 0,1200,1983 chr1 108461132 108465424 CA-CS-1-108461915-108462088.0[L] 0 + 108461132 108465424 255,0,0 3 52,173,237 0,783,4055 chr1 108461915 108467665 CA-CS-1-108465187-108465424.0[L] 0 + 108461915 108467665 255,0,0 3 173,237,215 0,3272,5535 chr1 108465187 108470638 CA-CS-1-108467450-108467665.0[L] 0 + 108465187 108470638 255,0,0 3 237,215,42 0,2263,5409 chr1 108560348 108606252 CA-CS-1-108600565-108600686.0[L] 0 + 108560348 108606252 255,0,0 3 217,121,30 0,40217,45874 chr1 1085877 1087597 CA-CS-1-1087138-1087204.0[L] 0 - 1085877 1087597 255,0,0 3 135,66,96 0,1261,1624 chr1 108600565 108612294 CA-CS-1-108606222-108606252.0[L] 0 + 108600565 108612294 255,0,0 3 121,30,117 0,5657,11612 chr1 108606222 108616428 CA-CS-1-108612177-108612294.0[L] 0 + 108606222 108616428 255,0,0 3 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0 - 108651029 108655698 255,0,0 3 180,135,113 0,3686,4556 chr1 108654715 108657579 CA-CS-1-108655585-108655698.0[L] 0 - 108654715 108657579 255,0,0 3 135,113,129 0,870,2735 chr1 108655585 108659962 CA-CS-1-108657450-108657579.0[L] 0 - 108655585 108659962 255,0,0 3 113,129,99 0,1865,4278 chr1 108657450 108661122 CA-CS-1-108659863-108659962.1[L] 0 - 108657450 108661122 255,0,0 3 129,99,160 0,2413,3512 chr1 108657450 108661526 CA-CS-1-108659863-108659962.0[L] 0 - 108657450 108661526 255,0,0 3 129,99,343 0,2413,3733 chr1 108692309 108696194 CA-CS-1-108695701-108695770.0[L] 0 + 108692309 108696194 255,0,0 3 558,69,152 0,3392,3733 chr1 108692312 108695770 CA-CS-1-108693589-108693642.0[L] 0 + 108692312 108695770 255,0,0 3 555,53,69 0,1277,3389 chr1 108693589 108696194 CA-CS-1-108695701-108695770.1[L] 0 + 108693589 108696194 255,0,0 3 53,69,152 0,2112,2453 chr1 108695701 108696337 CA-CS-1-108696042-108696194.0[L] 0 + 108695701 108696337 255,0,0 3 69,152,61 0,341,575 chr1 108696042 108698827 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255,0,0 3 30,57,125 0,2851,5992 chr1 111312189 111315435 CA-CS-1-111314539-111314596.2[L] 0 + 111312189 111315435 255,0,0 3 202,57,166 0,2350,3080 chr1 111314539 111315872 CA-CA-1-111315269-111315435.1[L] 0 + 111314539 111315872 255,0,0 3 57,166,139 0,730,1194 chr1 111314539 111317805 CA-CA-1-111315269-111315435.0[L] 0 + 111314539 111317805 255,0,0 3 57,166,125 0,730,3141 chr1 111314539 111317805 CA-CA-1-111315733-111315872.0[L] 0 + 111314539 111317805 255,0,0 3 57,139,125 0,1194,3141 chr1 111314539 111318109 CA-CS-1-111317680-111317805.0[L] 0 + 111314539 111318109 255,0,0 3 57,125,124 0,3141,3446 chr1 111315269 111317805 CA-CA-1-111315733-111315872.1[L] 0 + 111315269 111317805 255,0,0 3 166,139,125 0,464,2411 chr1 111315269 111318109 CA-CS-1-111317680-111317805.1[L] 0 + 111315269 111318109 255,0,0 3 166,125,124 0,2411,2716 chr1 111315733 111318109 CA-CS-1-111317680-111317805.2[L] 0 + 111315733 111318109 255,0,0 3 139,125,124 0,1947,2252 chr1 111317680 111318678 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chr1 111346909 111348646 CA-CA-1-111347673-111347772.0[L] 0 + 111346909 111348646 255,0,0 3 140,99,131 0,764,1606 chr1 111346909 111350223 CA-CA-1-111348515-111348646.0[L] 0 + 111346909 111350223 255,0,0 3 140,131,118 0,1606,3196 chr1 111346909 111353017 CA-CS-1-111350105-111350223.0[L] 0 + 111346909 111353017 255,0,0 3 140,118,1759 0,3196,4349 chr1 111347673 111350223 CA-CS-1-111348515-111348646.0[L] 0 + 111347673 111350223 255,0,0 3 99,131,118 0,842,2432 chr1 111348515 111353017 CA-CS-1-111350105-111350223.1[L] 0 + 111348515 111353017 255,0,0 3 131,118,1759 0,1590,2743 chr1 111384518 111388453 CA-CS-1-111386736-111386858.0[L] 0 - 111384518 111388453 255,0,0 3 77,122,200 0,2218,3735 chr1 111386736 111389266 CA-CS-1-111388253-111388453.0[L] 0 - 111386736 111389266 255,0,0 3 122,200,119 0,1517,2411 chr1 111388253 111389851 CA-CS-1-111389147-111389266.0[L] 0 - 111388253 111389851 255,0,0 3 200,119,90 0,894,1508 chr1 11139303 11144755 CA-CS-1-11139532-11139658.0[L] 0 - 11139303 11144755 255,0,0 3 132,126,108 0,229,5344 chr1 11139532 11145045 CA-CS-1-11144647-11144755.0[L] 0 - 11139532 11145045 255,0,0 3 126,108,78 0,5115,5435 chr1 111414314 111419726 CA-CS-1-111416322-111416458.0[L] 0 - 111414314 111419726 255,0,0 3 1030,136,117 0,2008,5295 chr1 111416322 111421461 CA-CS-1-111419609-111419726.0[L] 0 - 111416322 111421461 255,0,0 3 136,117,186 0,3287,4953 chr1 111419609 111421673 CA-CS-1-111421275-111421461.0[L] 0 - 111419609 111421673 255,0,0 3 117,186,109 0,1666,1955 chr1 111421275 111423051 CA-CS-1-111421564-111421673.0[L] 0 - 111421275 111423051 255,0,0 3 186,109,125 0,289,1651 chr1 111421564 111423708 CA-CS-1-111422926-111423051.0[L] 0 - 111421564 111423708 255,0,0 3 109,125,166 0,1362,1978 chr1 111422926 111425439 CA-CS-1-111423542-111423708.0[L] 0 - 111422926 111425439 255,0,0 3 125,166,57 0,616,2456 chr1 111423542 111426641 CA-CS-1-111425382-111425439.0[L] 0 - 111423542 111426641 255,0,0 3 166,57,205 0,1840,2894 chr1 111425382 111427091 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chr1 111442024 111443394 CA-CS-1-111442652-111442761.1[L] 0 - 111442024 111443394 255,0,0 3 69,109,72 0,628,1298 chr1 111442652 111443921 CA-CS-1-111443322-111443394.0[L] 0 - 111442652 111443921 255,0,0 3 109,72,55 0,670,1214 chr1 111443322 111444124 CA-CS-1-111443866-111443921.0[L] 0 - 111443322 111444124 255,0,0 3 72,55,71 0,544,731 chr1 111443866 111447144 CA-CS-1-111444053-111444124.1[L] 0 - 111443866 111447144 255,0,0 3 55,71,50 0,187,3228 chr1 111443866 111448804 CA-CS-1-111444053-111444124.0[L] 0 - 111443866 111448804 255,0,0 3 55,71,186 0,187,4752 chr1 111444053 111447576 CA-CS-1-111447094-111447144.0[L] 0 - 111444053 111447576 255,0,0 3 71,50,142 0,3041,3381 chr1 111444053 111448804 CA-CA-1-111447094-111447144.0[L] 0 - 111444053 111448804 255,0,0 3 71,50,186 0,3041,4565 chr1 111444053 111449308 CA-CS-1-111448618-111448804.2[L] 0 - 111444053 111449308 255,0,0 3 71,186,254 0,4565,5001 chr1 11144647 11146791 CA-CS-1-11144967-11145045.0[L] 0 - 11144647 11146791 255,0,0 3 108,78,116 0,320,2028 chr1 11144666 11149538 CA-CS-1-11145152-11145279.0[L] 0 + 11144666 11149538 255,0,0 3 220,127,269 0,486,4603 chr1 111447094 111448804 CA-CA-1-111447434-111447576.0[L] 0 - 111447094 111448804 255,0,0 3 50,142,186 0,340,1524 chr1 111447094 111449308 CA-CS-1-111448618-111448804.0[L] 0 - 111447094 111449308 255,0,0 3 50,186,254 0,1524,1960 chr1 111447434 111449308 CA-CS-1-111448618-111448804.1[L] 0 - 111447434 111449308 255,0,0 3 142,186,254 0,1184,1620 chr1 111449120 111454356 CA-CS-1-111449836-111449873.0[L] 0 + 111449120 111454356 255,0,0 3 461,37,146 0,716,5090 chr1 11144967 11150226 CA-CS-1-11146675-11146791.0[L] 0 - 11144967 11150226 255,0,0 3 78,116,101 0,1708,5158 chr1 111449836 111456249 CA-CS-1-111454210-111454356.0[L] 0 + 111449836 111456249 255,0,0 3 37,146,164 0,4374,6249 chr1 111454210 111456755 CA-CS-1-111456085-111456249.0[L] 0 + 111454210 111456755 255,0,0 3 146,164,126 0,1875,2419 chr1 111456085 111459636 CA-CS-1-111456629-111456755.0[L] 0 + 111456085 111459636 255,0,0 3 164,126,180 0,544,3371 chr1 111456629 111461903 CA-CS-1-111459456-111459636.0[L] 0 + 111456629 111461903 255,0,0 3 126,180,987 0,2827,4287 chr1 11146675 11157291 CA-CS-1-11150125-11150226.0[L] 0 - 11146675 11157291 255,0,0 3 116,101,140 0,3450,10476 chr1 111473868 111476867 CA-CS-1-111476017-111476065.0[L] 0 + 111473868 111476867 255,0,0 3 162,48,70 0,2149,2929 chr1 111476017 111477428 CA-CS-1-111476797-111476867.1[L] 0 + 111476017 111477428 255,0,0 3 48,70,95 0,780,1316 chr1 111476017 111477775 CA-CS-1-111476797-111476867.0[L] 0 + 111476017 111477775 255,0,0 3 48,70,125 0,780,1633 chr1 111476797 111477775 CA-CA-1-111477333-111477428.0[L] 0 + 111476797 111477775 255,0,0 3 70,95,125 0,536,853 chr1 111476797 111477775 CA-CS-1-111477333-111477428.0[L] 0 + 111476797 111477775 255,0,0 3 70,95,50 0,536,928 chr1 111476797 111478512 CA-CS-1-111477650-111477775.0[L] 0 + 111476797 111478512 255,0,0 3 70,125,530 0,853,1185 chr1 111477333 111477775 AA-AA-1-111477650-111477725.0[L] 0 + 111477333 111477775 255,0,0 3 95,75,50 0,317,392 chr1 111477333 111478512 CA-CS-1-111477650-111477775.1[L] 0 + 111477333 111478512 255,0,0 3 95,125,530 0,317,649 chr1 111477333 111478512 CA-CS-1-111477725-111477775.0[L] 0 + 111477333 111478512 255,0,0 3 95,50,530 0,392,649 chr1 111483347 111486652 CA-CS-1-111485739-111485840.0[L] 0 - 111483347 111486652 255,0,0 3 410,101,67 0,2392,3238 chr1 111485739 111488867 CA-CS-1-111486585-111486652.1[L] 0 - 111485739 111488867 255,0,0 3 101,67,191 0,846,2937 chr1 111485739 111489024 CA-CS-1-111486585-111486652.0[L] 0 - 111485739 111489024 255,0,0 3 101,67,348 0,846,2937 chr1 111486585 111490762 CA-CS-1-111488676-111489024.0[L] 0 - 111486585 111490762 255,0,0 3 67,348,107 0,2091,4070 chr1 111486585 111564003 CA-CS-1-111488676-111488867.0[L] 0 - 111486585 111564003 255,0,0 3 67,191,158 0,2091,77260 chr1 111488676 111504121 CA-CS-1-111490655-111490762.1[L] 0 - 111488676 111504121 255,0,0 3 348,107,1117 0,1979,14328 chr1 111488676 111564003 CA-CS-1-111490655-111490762.0[L] 0 - 111488676 111564003 255,0,0 3 348,107,158 0,1979,75169 chr1 111499428 111504121 AA-AA-1-111500556-111500620.0[L] 0 - 111499428 111504121 255,0,0 3 1128,64,1117 0,1128,3576 chr1 111499428 111504121 AD-AD-1-111503004-111503498.0[L] 0 - 111499428 111504121 255,0,0 3 1128,494,623 0,3576,4070 chr1 11150125 11167517 CA-CS-1-11157151-11157291.0[L] 0 - 11150125 11167517 255,0,0 3 101,140,76 0,7026,17316 chr1 11157151 11199403 CA-CS-1-11167441-11167517.0[L] 0 - 11157151 11199403 255,0,0 3 140,76,146 0,10290,42106 chr1 111599006 111604500 CA-CS-1-111602191-111602255.0[L] 0 - 111599006 111604500 255,0,0 3 1089,64,132 0,3185,5362 chr1 111602191 111604702 CA-CS-1-111604368-111604500.0[L] 0 - 111602191 111604702 255,0,0 3 64,132,74 0,2177,2437 chr1 111604368 111608318 CA-CS-1-111604628-111604702.0[L] 0 - 111604368 111608318 255,0,0 3 132,74,183 0,260,3767 chr1 111619782 111691417 CA-CA-1-111627469-111627563.0[L] 0 + 111619782 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CA-CS-1-111709148-111709264.0[L] 0 + 111704342 111716695 255,0,0 3 144,116,4265 0,4806,8088 chr1 111739840 111747798 CA-CA-1-111744374-111744529.0[L] 0 + 111739840 111747798 255,0,0 3 237,155,1739 0,4534,6219 chr1 111745316 111755509 CA-CS-1-111753097-111753254.0[L] 0 - 111745316 111755509 255,0,0 3 2388,157,222 0,7781,9971 chr1 111755567 111759568 CA-CS-1-111756645-111756740.0[L] 0 + 111755567 111759568 255,0,0 3 658,95,169 0,1078,3832 chr1 111756645 111760588 CA-CS-1-111759399-111759568.0[L] 0 + 111756645 111760588 255,0,0 3 95,169,115 0,2754,3828 chr1 111759399 111760848 CA-CS-1-111760473-111760588.0[L] 0 + 111759399 111760848 255,0,0 3 169,115,143 0,1074,1306 chr1 111760473 111761125 CA-CS-1-111760705-111760848.0[L] 0 + 111760473 111761125 255,0,0 3 115,143,139 0,232,513 chr1 111760705 111761284 CA-CS-1-111760986-111761125.0[L] 0 + 111760705 111761284 255,0,0 3 143,139,59 0,281,520 chr1 111760986 111762337 CA-CS-1-111761225-111761284.0[L] 0 + 111760986 111762337 255,0,0 3 139,59,83 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CA-CS-1-145333697-145333749.0[L] 0 - 145332880 145334631 255,0,0 3 173,52,173 0,817,1578 chr1 145333697 145335293 CA-CS-1-145334458-145334631.0[L] 0 - 145333697 145335293 255,0,0 3 52,173,52 0,761,1544 chr1 145334458 145336185 CA-CS-1-145335241-145335293.0[L] 0 - 145334458 145336185 255,0,0 3 173,52,173 0,783,1554 chr1 145335241 145336922 CA-CS-1-145336012-145336185.0[L] 0 - 145335241 145336922 255,0,0 3 52,173,109 0,771,1572 chr1 145336012 145337809 CA-CS-1-145336813-145336922.0[L] 0 - 145336012 145337809 255,0,0 3 173,109,173 0,801,1624 chr1 145336813 145338505 CA-CS-1-145337636-145337809.0[L] 0 - 145336813 145338505 255,0,0 3 109,173,52 0,823,1640 chr1 145337636 145339387 CA-CS-1-145338453-145338505.0[L] 0 - 145337636 145339387 255,0,0 3 173,52,173 0,817,1578 chr1 145338453 145340047 CA-CS-1-145339214-145339387.0[L] 0 - 145338453 145340047 255,0,0 3 52,173,52 0,761,1542 chr1 145339214 145340939 CA-CS-1-145339995-145340047.0[L] 0 - 145339214 145340939 255,0,0 3 173,52,173 0,781,1552 chr1 145339995 145341672 CA-CS-1-145340766-145340939.0[L] 0 - 145339995 145341672 255,0,0 3 52,173,109 0,771,1568