Mercurial > repos > bioitcore > splicetrap
view db/hg38v3/parallel/chr11.ae @ 2:01169764d7ca draft
planemo upload
| author | bioitcore |
|---|---|
| date | Thu, 07 Sep 2017 15:20:40 -0400 |
| parents | |
| children |
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line source
chr11 85629131 85631808 AD-AD-11-85629203-85629262.0[L] 0 + 85629131 85631808 255,0,0 3 72,59,122 0,72,2555 chr11 85629131 85634279 CA-CS-11-85631686-85631808.0[L] 0 + 85629131 85634279 255,0,0 3 131,122,194 0,2555,4954 chr11 85629131 85634279 CA-CS-11-85631686-85631808.2[L] 0 + 85629131 85634279 255,0,0 3 72,122,194 0,2555,4954 chr11 85631144 85634279 CA-CS-11-85631686-85631808.1[L] 0 + 85631144 85634279 255,0,0 3 172,122,194 0,542,2941 chr11 85631686 85635778 CA-CS-11-85634085-85634279.0[L] 0 + 85631686 85635778 255,0,0 3 122,194,112 0,2399,3980 chr11 85634085 85636539 CA-CS-11-85635666-85635778.0[L] 0 + 85634085 85636539 255,0,0 3 194,112,494 0,1581,1960 chr11 85647918 85654256 CA-CA-11-85650248-85650341.0[L] 0 + 85647918 85654256 255,0,0 3 171,93,194 0,2330,6144 chr11 85647918 85655708 CA-CS-11-85654062-85654256.1[L] 0 + 85647918 85655708 255,0,0 3 171,194,115 0,6144,7675 chr11 85650248 85655708 CA-CS-11-85654062-85654256.0[L] 0 + 85650248 85655708 255,0,0 3 93,194,115 0,3814,5345 chr11 85654062 85656553 CA-CS-11-85655593-85655708.0[L] 0 + 85654062 85656553 255,0,0 3 194,115,245 0,1531,2246 chr11 85657563 85662457 CA-CA-11-85661636-85661749.0[L] 0 - 85657563 85662457 255,0,0 3 3034,113,69 0,4073,4825 chr11 85657563 85662457 IR-IR-11-85660597-85662388.0[L] 0 - 85657563 85662457 255,0,0 3 3034,1791,69 0,3034,4825 chr11 85657563 85663601 CA-CS-11-85662388-85662457.0[L] 0 - 85657563 85663601 255,0,0 3 3034,69,78 0,4825,5960 chr11 85657563 85665138 CA-CS-11-85663523-85663601.0[L] 0 - 85657563 85665138 255,0,0 3 4894,78,1324 0,5960,6251 chr11 85657563 85665138 IR-IR-11-85662457-85663523.0[L] 0 - 85657563 85665138 255,0,0 3 4894,1066,1615 0,4894,5960 chr11 85661636 85663601 CA-CS-11-85662388-85662457.1[L] 0 - 85661636 85663601 255,0,0 3 113,69,78 0,752,1887 chr11 85662388 85665138 CA-CS-11-85663523-85663601.1[L] 0 - 85662388 85665138 255,0,0 3 69,78,1324 0,1135,1426 chr11 85663523 85665138 IR-IR-11-85663601-85663814.0[L] 0 - 85663523 85665138 255,0,0 3 78,213,1324 0,78,291 chr11 85694220 85698078 CA-CS-11-85696182-85696388.0[L] 0 - 85694220 85698078 255,0,0 3 1120,206,100 0,1962,3758 chr11 85696182 85700593 CA-CS-11-85697978-85698078.0[L] 0 - 85696182 85700593 255,0,0 3 206,100,79 0,1796,4332 chr11 85697978 85705028 CA-CS-11-85700514-85700593.0[L] 0 - 85697978 85705028 255,0,0 3 100,79,171 0,2536,6879 chr11 85700514 85707531 CA-CS-11-85704857-85705028.0[L] 0 - 85700514 85707531 255,0,0 3 79,171,103 0,4343,6914 chr11 85704857 85708150 CA-CS-11-85707428-85707531.0[L] 0 - 85704857 85708150 255,0,0 3 171,103,113 0,2571,3180 chr11 85704857 85709500 CA-CS-11-85707428-85707531.1[L] 0 - 85704857 85709500 255,0,0 3 171,103,170 0,2571,4473 chr11 85707428 85709500 CA-CA-11-85708037-85708150.0[L] 0 - 85707428 85709500 255,0,0 3 103,113,170 0,609,1902 chr11 85707428 85711232 CA-CS-11-85709330-85709500.0[L] 0 - 85707428 85711232 255,0,0 3 103,170,120 0,1902,3684 chr11 85707428 85714507 CA-CS-11-85709330-85709500.1[L] 0 - 85707428 85714507 255,0,0 3 103,170,95 0,1902,6984 chr11 85708037 85714507 CA-CS-11-85709330-85709500.2[L] 0 - 85708037 85714507 255,0,0 3 113,170,95 0,1293,6375 chr11 85709330 85714507 CA-CA-11-85711112-85711232.0[L] 0 - 85709330 85714507 255,0,0 3 170,120,95 0,1782,5082 chr11 85709330 85717530 CA-CS-11-85714412-85714507.1[L] 0 - 85709330 85717530 255,0,0 3 170,95,48 0,5082,8152 chr11 85709330 85719350 CA-CS-11-85711112-85711232.0[L] 0 - 85709330 85719350 255,0,0 3 170,120,561 0,1782,9459 chr11 85711112 85717530 CA-CS-11-85714412-85714507.0[L] 0 - 85711112 85717530 255,0,0 3 120,95,48 0,3300,6370 chr11 85711112 85718843 CA-CS-11-85714412-85714507.2[L] 0 - 85711112 85718843 255,0,0 3 120,95,54 0,3300,7677 chr11 85714412 85718843 CA-CA-11-85717482-85717530.0[L] 0 - 85714412 85718843 255,0,0 3 95,48,54 0,3070,4377 chr11 85714412 85719350 CA-CS-11-85717482-85717530.0[L] 0 - 85714412 85719350 255,0,0 3 95,48,561 0,3070,4377 chr11 85714412 85720959 CA-CS-11-85718789-85718843.1[L] 0 - 85714412 85720959 255,0,0 3 95,54,102 0,4377,6445 chr11 85717482 85719180 CA-CS-11-85718789-85718843.2[L] 0 - 85717482 85719180 255,0,0 3 48,54,191 0,1307,1507 chr11 85717482 85720959 CA-CS-11-85718789-85718843.0[L] 0 - 85717482 85720959 255,0,0 3 48,54,102 0,1307,3375 chr11 85718789 85727967 CA-CS-11-85720857-85720959.0[L] 0 - 85718789 85727967 255,0,0 3 54,102,72 0,2068,9106 chr11 85720857 85734742 CA-CS-11-85727895-85727967.0[L] 0 - 85720857 85734742 255,0,0 3 102,72,804 0,7038,13081 chr11 85727895 85736612 CA-CS-11-85733938-85734742.0[L] 0 - 85727895 85736612 255,0,0 3 72,804,112 0,6043,8605 chr11 85727895 85736615 CA-CS-11-85733938-85734742.1[L] 0 - 85727895 85736615 255,0,0 3 72,804,115 0,6043,8605 chr11 85733938 85737656 CA-CS-11-85736500-85736612.0[L] 0 - 85733938 85737656 255,0,0 3 804,112,82 0,2562,3636 chr11 85733938 85737656 CA-CS-11-85736500-85736615.0[L] 0 - 85733938 85737656 255,0,0 3 804,115,82 0,2562,3636 chr11 85736500 85737656 AA-AA-11-85736612-85736615.0[L] 0 - 85736500 85737656 255,0,0 3 112,3,82 0,112,1074 chr11 85736500 85745772 CA-CS-11-85737574-85737656.0[L] 0 - 85736500 85745772 255,0,0 3 112,82,136 0,1074,9136 chr11 85736500 85745772 CA-CS-11-85737574-85737656.1[L] 0 - 85736500 85745772 255,0,0 3 115,82,136 0,1074,9136 chr11 85737574 85748423 CA-CS-11-85745636-85745772.0[L] 0 - 85737574 85748423 255,0,0 3 82,136,152 0,8062,10697 chr11 85745636 85758069 CA-CS-11-85748271-85748423.1[L] 0 - 85745636 85758069 255,0,0 3 136,152,445 0,2635,11988 chr11 85745636 85758114 CA-CS-11-85748271-85748423.2[L] 0 - 85745636 85758114 255,0,0 3 136,152,490 0,2635,11988 chr11 85745636 85811159 CA-CS-11-85748271-85748423.0[L] 0 - 85745636 85811159 255,0,0 3 136,152,206 0,2635,65317 chr11 85748271 85811159 CA-CA-11-85757624-85758114.0[L] 0 - 85748271 85811159 255,0,0 3 152,490,206 0,9353,62682 chr11 85855100 85873295 CA-CS-11-85865095-85865218.0[L] 0 + 85855100 85873295 255,0,0 3 484,123,85 0,9995,18110 chr11 85865095 85882675 CA-CS-11-85873210-85873295.0[L] 0 + 85865095 85882675 255,0,0 3 123,85,163 0,8115,17417 chr11 85873210 85886367 CA-CS-11-85882512-85882675.0[L] 0 + 85873210 85886367 255,0,0 3 85,163,168 0,9302,12989 chr11 85882512 85895384 CA-CS-11-85886199-85886367.0[L] 0 + 85882512 85895384 255,0,0 3 163,168,92 0,3687,12780 chr11 85886199 85899015 CA-CS-11-85895292-85895384.0[L] 0 + 85886199 85899015 255,0,0 3 168,92,69 0,9093,12747 chr11 85895292 85911402 CA-CS-11-85898946-85899015.0[L] 0 + 85895292 85911402 255,0,0 3 92,69,122 0,3654,15988 chr11 85898946 85912741 CA-CS-11-85911280-85911402.1[L] 0 + 85898946 85912741 255,0,0 3 69,122,93 0,12334,13702 chr11 85898946 85915498 CA-CS-11-85911280-85911402.0[L] 0 + 85898946 85915498 255,0,0 3 69,122,80 0,12334,16472 chr11 85911280 85915498 CA-CA-11-85912648-85912741.0[L] 0 + 85911280 85915498 255,0,0 3 122,93,80 0,1368,4138 chr11 85911280 85916233 CA-CS-11-85915418-85915498.0[L] 0 + 85911280 85916233 255,0,0 3 122,80,206 0,4138,4747 chr11 85912648 85916233 CA-CS-11-85915418-85915498.1[L] 0 + 85912648 85916233 255,0,0 3 93,80,206 0,2770,3379 chr11 85915418 85920020 CA-CS-11-85916027-85916233.0[L] 0 + 85915418 85920020 255,0,0 3 80,206,672 0,609,3930 chr11 85957170 85976682 CA-CS-11-85974707-85974812.0[L] 0 - 85957170 85976682 255,0,0 3 1890,105,60 0,17537,19452 chr11 85974707 85978093 CA-CS-11-85976622-85976682.0[L] 0 - 85974707 85978093 255,0,0 3 105,60,24 0,1915,3362 chr11 85974707 85981228 CA-CS-11-85976622-85976682.1[L] 0 - 85974707 85981228 255,0,0 3 105,60,100 0,1915,6421 chr11 85976622 85981228 CA-CA-11-85978069-85978093.0[L] 0 - 85976622 85981228 255,0,0 3 60,24,100 0,1447,4506 chr11 85976622 85981775 CA-CS-11-85981128-85981228.1[L] 0 - 85976622 85981775 255,0,0 3 60,100,31 0,4506,5122 chr11 85978069 85981775 CA-CS-11-85981128-85981228.0[L] 0 - 85978069 85981775 255,0,0 3 24,100,31 0,3059,3675 chr11 85981128 85982003 CA-CS-11-85981744-85981775.0[L] 0 - 85981128 85982003 255,0,0 3 100,31,132 0,616,743 chr11 85981744 85983973 CA-CS-11-85981871-85982003.0[L] 0 - 85981744 85983973 255,0,0 3 31,132,108 0,127,2121 chr11 85981871 85990378 CA-CS-11-85983865-85983973.0[L] 0 - 85981871 85990378 255,0,0 3 132,108,129 0,1994,8378 chr11 85981871 85990399 CA-CS-11-85983865-85983973.2[L] 0 - 85981871 85990399 255,0,0 3 132,108,150 0,1994,8378 chr11 85981871 85996929 CA-CS-11-85983865-85983973.1[L] 0 - 85981871 85996929 255,0,0 3 132,108,104 0,1994,14954 chr11 85983865 85996929 CA-CA-11-85990249-85990378.0[L] 0 - 85983865 85996929 255,0,0 3 108,129,104 0,6384,12960 chr11 85983865 85996929 CA-CA-11-85990249-85990399.0[L] 0 - 85983865 85996929 255,0,0 3 108,150,104 0,6384,12960 chr11 85983865 86000779 CA-CS-11-85996825-85996929.0[L] 0 - 85983865 86000779 255,0,0 3 108,104,137 0,12960,16777 chr11 85990249 85996929 AA-AA-11-85990378-85990399.0[L] 0 - 85990249 85996929 255,0,0 3 129,21,104 0,129,6576 chr11 85990249 86000779 CA-CS-11-85996825-85996929.1[L] 0 - 85990249 86000779 255,0,0 3 150,104,137 0,6576,10393 chr11 85990249 86000779 CA-CS-11-85996825-85996929.2[L] 0 - 85990249 86000779 255,0,0 3 129,104,137 0,6576,10393 chr11 85996825 86001158 CA-CS-11-86000642-86000779.0[L] 0 - 85996825 86001158 255,0,0 3 104,137,124 0,3817,4209 chr11 86000642 86003451 CA-CS-11-86001034-86001158.0[L] 0 - 86000642 86003451 255,0,0 3 137,124,86 0,392,2723 chr11 86001034 86007583 CA-CS-11-86003365-86003451.0[L] 0 - 86001034 86007583 255,0,0 3 124,86,42 0,2331,6507 chr11 86003365 86011136 CA-CS-11-86007541-86007583.0[L] 0 - 86003365 86011136 255,0,0 3 86,42,107 0,4176,7664 chr11 86007541 86012392 CA-CS-11-86011029-86011136.0[L] 0 - 86007541 86012392 255,0,0 3 42,107,112 0,3488,4739 chr11 86011029 86014963 CA-CS-11-86012280-86012392.0[L] 0 - 86011029 86014963 255,0,0 3 107,112,94 0,1251,3840 chr11 86012280 86022469 CA-CS-11-86014869-86014963.0[L] 0 - 86012280 86022469 255,0,0 3 112,94,103 0,2589,10086 chr11 86014869 86026367 CA-CS-11-86022366-86022469.0[L] 0 - 86014869 86026367 255,0,0 3 94,103,76 0,7497,11422 chr11 86022366 86031611 CA-CS-11-86026291-86026367.0[L] 0 - 86022366 86031611 255,0,0 3 103,76,143 0,3925,9102 chr11 86026291 86069097 CA-CS-11-86031468-86031611.0[L] 0 - 86026291 86069097 255,0,0 3 76,143,447 0,5177,42359 chr11 86026291 86069881 CA-CS-11-86031468-86031611.1[L] 0 - 86026291 86069881 255,0,0 3 76,143,162 0,5177,43428 chr11 8612036 8619535 CA-CS-11-8618749-8618968.0[L] 0 - 8612036 8619535 255,0,0 3 5967,219,153 0,6713,7346 chr11 8618749 8620124 CA-CS-11-8619382-8619535.0[L] 0 - 8618749 8620124 255,0,0 3 219,153,75 0,633,1300 chr11 8619382 8620572 CA-CS-11-8620049-8620124.0[L] 0 - 8619382 8620572 255,0,0 3 153,75,127 0,667,1063 chr11 8620049 8621321 CA-CS-11-8620445-8620572.0[L] 0 - 8620049 8621321 255,0,0 3 75,127,290 0,396,982 chr11 8620445 8621819 CA-CS-11-8621031-8621321.0[L] 0 - 8620445 8621819 255,0,0 3 127,290,175 0,586,1199 chr11 8621031 8622876 CA-CS-11-8621644-8621819.0[L] 0 - 8621031 8622876 255,0,0 3 290,175,61 0,613,1784 chr11 8621644 8624454 CA-CS-11-8622815-8622876.0[L] 0 - 8621644 8624454 255,0,0 3 175,61,96 0,1171,2714 chr11 8622815 8625228 CA-CS-11-8624358-8624454.0[L] 0 - 8622815 8625228 255,0,0 3 61,96,520 0,1543,1893 chr11 8624358 8638815 CA-CS-11-8624708-8625228.0[L] 0 - 8624358 8638815 255,0,0 3 96,520,162 0,350,14295 chr11 86244383 86252240 CA-CS-11-86250295-86250448.0[L] 0 + 86244383 86252240 255,0,0 3 960,153,93 0,5912,7764 chr11 8624708 8641152 CA-CS-11-8638653-8638815.0[L] 0 - 8624708 8641152 255,0,0 3 520,162,926 0,13945,15518 chr11 86250295 86255287 CA-CS-11-86252147-86252240.0[L] 0 + 86250295 86255287 255,0,0 3 153,93,66 0,1852,4926 chr11 86252147 86256512 CA-CS-11-86255221-86255287.0[L] 0 + 86252147 86256512 255,0,0 3 93,66,126 0,3074,4239 chr11 862549 865614 CA-CS-11-864436-864511.0[L] 0 + 862549 865614 255,0,0 3 192,75,102 0,1887,2963 chr11 86255221 86257596 CA-CS-11-86256386-86256512.0[L] 0 + 86255221 86257596 255,0,0 3 66,126,82 0,1165,2293 chr11 86256386 86264263 CA-CS-11-86257514-86257596.0[L] 0 + 86256386 86264263 255,0,0 3 126,82,92 0,1128,7785 chr11 86257514 86266216 CA-CS-11-86264171-86264263.0[L] 0 + 86257514 86266216 255,0,0 3 82,92,134 0,6657,8568 chr11 86257514 86277138 CA-CS-11-86264171-86264263.1[L] 0 + 86257514 86277138 255,0,0 3 82,92,159 0,6657,19465 chr11 86264171 86268561 CA-CS-11-86266082-86266216.0[L] 0 + 86264171 86268561 255,0,0 3 92,134,106 0,1911,4284 chr11 86264171 86277991 CA-CS-11-86276979-86277138.2[L] 0 + 86264171 86277991 255,0,0 3 92,159,74 0,12808,13746 chr11 86266082 86270157 CA-CS-11-86268455-86268561.1[L] 0 + 86266082 86270157 255,0,0 3 134,106,75 0,2373,4000 chr11 86266082 86277138 CA-CS-11-86268455-86268561.0[L] 0 + 86266082 86277138 255,0,0 3 134,106,159 0,2373,10897 chr11 86268455 86277138 CA-CA-11-86270082-86270157.0[L] 0 + 86268455 86277138 255,0,0 3 106,75,159 0,1627,8524 chr11 86268455 86277991 CA-CS-11-86276979-86277138.1[L] 0 + 86268455 86277991 255,0,0 3 106,159,74 0,8524,9462 chr11 86270082 86277991 CA-CS-11-86276979-86277138.0[L] 0 + 86270082 86277991 255,0,0 3 75,159,74 0,6897,7835 chr11 86276979 86278810 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