Mercurial > repos > bioitcore > splicetrap
view db/hg38v3/parallel/chr19.aa @ 2:01169764d7ca draft
planemo upload
| author | bioitcore |
|---|---|
| date | Thu, 07 Sep 2017 15:20:40 -0400 |
| parents | |
| children |
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line source
chr19 10001523 10003714 CA-CS-19-10001767-10001881.0[L] 0 - 10001523 10003714 255,0,0 3 147,114,150 0,244,2041 chr19 10001767 10004145 CA-CS-19-10003564-10003714.0[L] 0 - 10001767 10004145 255,0,0 3 114,150,105 0,1797,2273 chr19 10003564 10005714 CA-CS-19-10004040-10004145.0[L] 0 - 10003564 10005714 255,0,0 3 150,105,157 0,476,1993 chr19 10004040 10005985 CA-CS-19-10005557-10005714.0[L] 0 - 10004040 10005985 255,0,0 3 105,157,190 0,1517,1755 chr19 1000418 1005553 CA-CS-19-1003129-1003722.0[L] 0 + 1000418 1005553 255,0,0 3 445,593,1033 0,2711,4102 chr19 10005557 10006231 CA-CS-19-10005795-10005985.0[L] 0 - 10005557 10006231 255,0,0 3 157,190,159 0,238,515 chr19 10005795 10010471 CA-CS-19-10006072-10006231.0[L] 0 - 10005795 10010471 255,0,0 3 190,159,174 0,277,4502 chr19 10013248 10018910 CA-CS-19-10017056-10017215.0[L] 0 + 10013248 10018910 255,0,0 3 352,159,180 0,3808,5482 chr19 10017056 10020802 CA-CS-19-10018730-10018910.0[L] 0 + 10017056 10020802 255,0,0 3 159,180,94 0,1674,3652 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3 127,61,2505 0,330,1281 chr19 12092262 12114678 CA-CS-19-12110304-12110431.0[L] 0 + 12092262 12114678 255,0,0 3 208,127,3433 0,18042,18983 chr19 12131352 12135895 CA-CS-19-12135499-12135560.0[L] 0 - 12131352 12135895 255,0,0 3 2633,61,127 0,4147,4416 chr19 12131352 12135904 CA-CS-19-12135499-12135560.1[L] 0 - 12131352 12135904 255,0,0 3 2633,61,136 0,4147,4416 chr19 12135499 12140325 CA-CS-19-12135768-12135904.0[L] 0 - 12135499 12140325 255,0,0 3 61,136,146 0,269,4680 chr19 12135499 12140407 CA-CS-19-12135768-12135895.0[L] 0 - 12135499 12140407 255,0,0 3 61,127,228 0,269,4680 chr19 12135499 12140407 CA-CS-19-12135768-12135904.1[L] 0 - 12135499 12140407 255,0,0 3 61,136,228 0,269,4680 chr19 12135768 12140407 AA-AA-19-12135895-12135904.0[L] 0 - 12135768 12140407 255,0,0 3 127,9,228 0,127,4411 chr19 12135768 12142715 CA-CS-19-12140179-12140325.0[L] 0 - 12135768 12142715 255,0,0 3 136,146,75 0,4411,6872 chr19 12140179 12147455 CA-CS-19-12142640-12142715.0[L] 0 - 12140179 12147455 255,0,0 3 146,75,61 0,2461,7215 chr19 12142640 12147802 CA-CS-19-12147394-12147455.2[L] 0 - 12142640 12147802 255,0,0 3 75,61,127 0,4754,5035 chr19 12144893 12147802 CA-CS-19-12147394-12147455.0[L] 0 - 12144893 12147802 255,0,0 3 1331,61,123 0,2501,2786 chr19 12144893 12147802 CA-CS-19-12147394-12147455.1[L] 0 - 12144893 12147802 255,0,0 3 1331,61,127 0,2501,2782 chr19 12147394 12147802 AD-AD-19-12147675-12147679.0[L] 0 - 12147394 12147802 255,0,0 3 61,4,123 0,281,285 chr19 12147394 12156731 CA-CS-19-12147675-12147802.0[L] 0 - 12147394 12156731 255,0,0 3 61,127,176 0,281,9161 chr19 12147394 12156731 CA-CS-19-12147679-12147802.0[L] 0 - 12147394 12156731 255,0,0 3 61,123,176 0,285,9161 chr19 12163056 12186174 CA-CS-19-12185784-12185911.0[L] 0 + 12163056 12186174 255,0,0 3 150,127,61 0,22728,23057 chr19 1218416 1220505 CA-CS-19-1219323-1219413.0[L] 0 + 1218416 1220505 255,0,0 3 84,90,133 0,907,1956 chr19 12185784 12189249 CA-CS-19-12186113-12186174.0[L] 0 + 12185784 12189249 255,0,0 3 127,61,2680 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12677290 12679719 CA-CS-19-12679456-12679543.0[L] 0 - 12677290 12679719 255,0,0 3 106,87,97 0,2166,2332 chr19 12679456 12679922 CA-CS-19-12679622-12679719.0[L] 0 - 12679456 12679922 255,0,0 3 87,97,122 0,166,344 chr19 12679622 12680325 CA-CS-19-12679800-12679922.0[L] 0 - 12679622 12680325 255,0,0 3 97,122,165 0,178,538 chr19 12679800 12681211 CA-CS-19-12680160-12680325.1[L] 0 - 12679800 12681211 255,0,0 3 122,165,179 0,360,1232 chr19 12679800 12681887 CA-CS-19-12680160-12680325.0[L] 0 - 12679800 12681887 255,0,0 3 122,165,328 0,360,1759 chr19 12688915 12689630 CA-CS-19-12689371-12689437.0[L] 0 - 12688915 12689630 255,0,0 3 375,66,90 0,456,625 chr19 12689371 12689874 CA-CS-19-12689540-12689630.0[L] 0 - 12689371 12689874 255,0,0 3 66,90,114 0,169,389 chr19 12689540 12690110 CA-CS-19-12689760-12689874.0[L] 0 - 12689540 12690110 255,0,0 3 90,114,149 0,220,421 chr19 12689760 12691257 CA-CS-19-12689961-12690110.0[L] 0 - 12689760 12691257 255,0,0 3 114,149,92 0,201,1405 chr19 12689961 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CA-CS-19-12701325-12701453.0[L] 0 - 12699193 12701672 255,0,0 3 2050,128,75 0,2132,2404 chr19 12701325 12701851 CA-CS-19-12701597-12701672.0[L] 0 - 12701325 12701851 255,0,0 3 128,75,100 0,272,426 chr19 12701597 12702147 CA-CS-19-12701751-12701851.0[L] 0 - 12701597 12702147 255,0,0 3 75,100,76 0,154,474 chr19 12701597 12702177 CA-CS-19-12701751-12701851.1[L] 0 - 12701597 12702177 255,0,0 3 75,100,106 0,154,474 chr19 12701751 12702918 CA-CS-19-12702071-12702147.0[L] 0 - 12701751 12702918 255,0,0 3 100,76,96 0,320,1071 chr19 12701751 12702918 CA-CS-19-12702071-12702177.0[L] 0 - 12701751 12702918 255,0,0 3 100,106,96 0,320,1071 chr19 12702071 12702918 AA-AA-19-12702147-12702177.0[L] 0 - 12702071 12702918 255,0,0 3 76,30,96 0,76,751 chr19 12702071 12703526 CA-CS-19-12702822-12702918.0[L] 0 - 12702071 12703526 255,0,0 3 106,96,99 0,751,1356 chr19 12702071 12703526 CA-CS-19-12702822-12702918.1[L] 0 - 12702071 12703526 255,0,0 3 76,96,99 0,751,1356 chr19 12702822 12703801 CA-CS-19-12703427-12703526.0[L] 0 - 12702822 12703801 255,0,0 3 96,99,88 0,605,891 chr19 12703427 12705398 CA-CS-19-12703713-12703801.0[L] 0 - 12703427 12705398 255,0,0 3 99,88,159 0,286,1812 chr19 12703713 12705599 CA-CS-19-12705239-12705398.0[L] 0 - 12703713 12705599 255,0,0 3 88,159,108 0,1526,1778 chr19 12705239 12705768 CA-CS-19-12705491-12705599.0[L] 0 - 12705239 12705768 255,0,0 3 159,108,87 0,252,442 chr19 12705491 12706367 CA-CS-19-12705681-12705768.0[L] 0 - 12705491 12706367 255,0,0 3 108,87,172 0,190,704 chr19 12705681 12706795 CA-CS-19-12706195-12706367.0[L] 0 - 12705681 12706795 255,0,0 3 87,172,226 0,514,888 chr19 12706195 12710773 CA-CS-19-12706569-12706795.0[L] 0 - 12706195 12710773 255,0,0 3 172,226,153 0,374,4425 chr19 12706569 12711461 CA-CS-19-12710620-12710773.0[L] 0 - 12706569 12711461 255,0,0 3 226,153,166 0,4051,4726 chr19 1270866 1271467 CA-CS-19-1271139-1271246.0[L] 0 + 1270866 1271467 255,0,0 3 170,107,139 0,273,462 chr19 1270927 1271467 CA-CA-19-1271139-1271246.0[L] 0 + 1270927 1271467 255,0,0 3 109,107,139 0,212,401 chr19 1270927 1271632 CA-CS-19-1271328-1271467.0[L] 0 + 1270927 1271632 255,0,0 3 109,139,82 0,401,623 chr19 12710620 12711613 CA-CS-19-12711295-12711461.0[L] 0 - 12710620 12711613 255,0,0 3 153,166,61 0,675,932 chr19 12711295 12714939 CA-CS-19-12711552-12711613.0[L] 0 - 12711295 12714939 255,0,0 3 166,61,119 0,257,3525 chr19 1271139 1271632 CA-CS-19-1271328-1271467.1[L] 0 + 1271139 1271632 255,0,0 3 107,139,82 0,189,411 chr19 12711552 12715169 CA-CS-19-12714820-12714939.0[L] 0 - 12711552 12715169 255,0,0 3 61,119,123 0,3268,3494 chr19 1271328 1272051 CA-CS-19-1271550-1271632.2[L] 0 + 1271328 1272051 255,0,0 3 139,82,71 0,222,652 chr19 1271328 1273172 CA-CS-19-1271550-1271632.0[L] 0 + 1271328 1273172 255,0,0 3 139,82,1192 0,222,652 chr19 1271328 1274440 CA-CS-19-1271550-1271632.1[L] 0 + 1271328 1274440 255,0,0 3 139,82,2460 0,222,652 chr19 12714820 12715324 CA-CS-19-12715046-12715169.0[L] 0 - 12714820 12715324 255,0,0 3 119,123,82 0,226,422 chr19 12715046 12715538 CA-CS-19-12715242-12715324.0[L] 0 - 12715046 12715538 255,0,0 3 123,82,134 0,196,358 chr19 12715242 12715739 CA-CS-19-12715404-12715538.0[L] 0 - 12715242 12715739 255,0,0 3 82,134,107 0,162,390 chr19 12715404 12719178 CA-CS-19-12715632-12715739.0[L] 0 - 12715404 12719178 255,0,0 3 134,107,150 0,228,3624 chr19 1271550 1273172 CA-CS-19-1271980-1272051.0[L] 0 + 1271550 1273172 255,0,0 3 82,71,746 0,430,876 chr19 1271550 1274809 CA-CS-19-1271980-1272051.1[L] 0 + 1271550 1274809 255,0,0 3 82,71,503 0,430,2756 chr19 1271550 1274809 CA-CS-19-1271980-1274440.0[L] 0 + 1271550 1274809 255,0,0 3 82,2460,161 0,430,3098 chr19 12715632 12719336 CA-CS-19-12719028-12719178.0[L] 0 - 12715632 12719336 255,0,0 3 107,150,76 0,3396,3628 chr19 12719028 12720990 CA-CS-19-12719260-12719336.0[L] 0 - 12719028 12720990 255,0,0 3 150,76,112 0,232,1850 chr19 12719260 12722291 CA-CS-19-12720878-12720990.2[L] 0 - 12719260 12722291 255,0,0 3 76,112,158 0,1618,2873 chr19 12719260 12722648 CA-CS-19-12720878-12720990.0[L] 0 - 12719260 12722648 255,0,0 3 76,112,172 0,1618,3216 chr19 12719260 12723365 CA-CS-19-12720878-12720990.1[L] 0 - 12719260 12723365 255,0,0 3 76,112,117 0,1618,3988 chr19 1271980 1273172 IR-IR-19-1272051-1272426.0[L] 0 + 1271980 1273172 255,0,0 3 71,375,746 0,71,446 chr19 12720878 12723996 CA-CS-19-12723248-12723365.0[L] 0 - 12720878 12723996 255,0,0 3 112,117,228 0,2370,2890 chr19 12730639 12734775 CA-CA-19-12731343-12731421.0[L] 0 - 12730639 12734775 255,0,0 3 429,78,463 0,704,3673 chr19 12730639 12734775 CA-CA-19-12731343-12731557.0[L] 0 - 12730639 12734775 255,0,0 3 429,214,463 0,704,3673 chr19 12730639 12734775 CA-CS-19-12731343-12731421.0[L] 0 - 12730639 12734775 255,0,0 3 429,78,440 0,704,3696 chr19 12731343 12734775 AA-AA-19-12731421-12731557.0[L] 0 - 12731343 12734775 255,0,0 3 78,136,463 0,78,2969 chr19 12731343 12734775 AD-AD-19-12734312-12734335.0[L] 0 - 12731343 12734775 255,0,0 3 78,23,440 0,2969,2992 chr19 12737458 12745525 CA-CS-19-12738510-12738658.0[L] 0 + 12737458 12745525 255,0,0 3 208,148,149 0,1052,7918 chr19 12738510 12745759 CA-CS-19-12745376-12745525.0[L] 0 + 12738510 12745759 255,0,0 3 148,149,151 0,6866,7098 chr19 12745376 12747304 CA-CS-19-12745608-12745759.0[L] 0 + 12745376 12747304 255,0,0 3 149,151,108 0,232,1820 chr19 12745608 12747592 CA-CS-19-12747196-12747304.0[L] 0 + 12745608 12747592 255,0,0 3 151,108,198 0,1588,1786 chr19 12747196 12748324 CA-CS-19-12747394-12747592.0[L] 0 + 12747196 12748324 255,0,0 3 108,198,352 0,198,776 chr19 12752592 12754785 CA-CS-19-12753259-12753354.0[L] 0 + 12752592 12754785 255,0,0 3 152,95,234 0,667,1959 chr19 12753259 12755031 CA-CS-19-12754551-12754785.0[L] 0 + 12753259 12755031 255,0,0 3 95,234,155 0,1292,1617 chr19 12754551 12755456 CA-CS-19-12754876-12755031.0[L] 0 + 12754551 12755456 255,0,0 3 234,155,78 0,325,827 chr19 12754876 12755767 CA-CS-19-12755378-12755456.0[L] 0 + 12754876 12755767 255,0,0 3 155,78,153 0,502,738 chr19 1275520 1279244 CA-CS-19-1277182-1277299.0[L] 0 + 1275520 1279244 255,0,0 3 310,117,468 0,1662,3256 chr19 12755378 12755935 CA-CS-19-12755614-12755767.0[L] 0 + 12755378 12755935 255,0,0 3 78,153,81 0,236,476 chr19 12755614 12756295 CA-CS-19-12755854-12755935.0[L] 0 + 12755614 12756295 255,0,0 3 153,81,155 0,240,526 chr19 12755854 12758457 CA-CS-19-12756140-12756295.0[L] 0 + 12755854 12758457 255,0,0 3 81,155,807 0,286,1796 chr19 12763002 12763778 CA-CS-19-12763527-12763599.0[L] 0 - 12763002 12763778 255,0,0 3 429,72,111 0,525,665 chr19 12763527 12764917 CA-CS-19-12763667-12763778.0[L] 0 - 12763527 12764917 255,0,0 3 72,111,104 0,140,1286 chr19 12763667 12765081 CA-CS-19-12764813-12764917.0[L] 0 - 12763667 12765081 255,0,0 3 111,104,83 0,1146,1331 chr19 12764813 12765724 CA-CS-19-12764998-12765081.0[L] 0 - 12764813 12765724 255,0,0 3 104,83,35 0,185,876 chr19 12764998 12765834 CA-CS-19-12765689-12765724.1[L] 0 - 12764998 12765834 255,0,0 3 83,35,6 0,691,830 chr19 12764998 12766014 CA-CS-19-12765689-12765724.0[L] 0 - 12764998 12766014 255,0,0 3 83,35,88 0,691,928 chr19 12765689 12766014 CA-CA-19-12765828-12765834.0[L] 0 - 12765689 12766014 255,0,0 3 35,6,88 0,139,237 chr19 12765689 12766240 CA-CS-19-12765926-12766014.0[L] 0 - 12765689 12766240 255,0,0 3 35,88,138 0,237,413 chr19 12765828 12766240 CA-CS-19-12765926-12766014.1[L] 0 - 12765828 12766240 255,0,0 3 6,88,138 0,98,274 chr19 12765926 12767464 CA-CS-19-12766102-12766240.0[L] 0 - 12765926 12767464 255,0,0 3 88,138,70 0,176,1468 chr19 12766102 12767903 CA-CS-19-12767394-12767464.0[L] 0 - 12766102 12767903 255,0,0 3 138,70,88 0,1292,1713 chr19 12767394 12768123 CA-CS-19-12767815-12767903.0[L] 0 - 12767394 12768123 255,0,0 3 70,88,111 0,421,618 chr19 12767815 12770082 CA-CS-19-12768012-12768123.0[L] 0 - 12767815 12770082 255,0,0 3 88,111,202 0,197,2065 chr19 12768012 12771072 CA-CS-19-12769880-12770082.0[L] 0 - 12768012 12771072 255,0,0 3 111,202,141 0,1868,2919 chr19 12769880 12771319 CA-CS-19-12770931-12771072.0[L] 0 - 12769880 12771319 255,0,0 3 202,141,161 0,1051,1278 chr19 12770931 12771477 CA-CS-19-12771158-12771319.0[L] 0 - 12770931 12771477 255,0,0 3 141,161,81 0,227,465 chr19 12771158 12772252 CA-CS-19-12771396-12771477.0[L] 0 - 12771158 12772252 255,0,0 3 161,81,63 0,238,1031 chr19 12771396 12772680 CA-CS-19-12772189-12772252.0[L] 0 - 12771396 12772680 255,0,0 3 81,63,68 0,793,1216 chr19 12772189 12772912 CA-CS-19-12772612-12772680.0[L] 0 - 12772189 12772912 255,0,0 3 63,68,133 0,423,590 chr19 12772612 12773044 CA-CS-19-12772779-12772912.0[L] 0 - 12772612 12773044 255,0,0 3 68,133,51 0,167,381 chr19 12772779 12774741 CA-CS-19-12772993-12773044.0[L] 0 - 12772779 12774741 255,0,0 3 133,51,73 0,214,1889 chr19 12772993 12774897 CA-CS-19-12774668-12774741.0[L] 0 - 12772993 12774897 255,0,0 3 51,73,86 0,1675,1818 chr19 12774668 12775620 CA-CS-19-12774811-12774897.0[L] 0 - 12774668 12775620 255,0,0 3 73,86,216 0,143,736 chr19 12796819 12800299 CA-CS-19-12799858-12799989.0[L] 0 - 12796819 12800299 255,0,0 3 347,131,123 0,3039,3357 chr19 12799858 12801069 CA-CS-19-12800176-12800299.0[L] 0 - 12799858 12801069 255,0,0 3 131,123,154 0,318,1057 chr19 12800176 12801270 CA-CS-19-12800915-12801069.0[L] 0 - 12800176 12801270 255,0,0 3 123,154,112 0,739,982 chr19 12800915 12801910 CA-CS-19-12801158-12801270.0[L] 0 - 12800915 12801910 255,0,0 3 154,112,171 0,243,824 chr19 12806613 12807329 CA-CS-19-12807007-12807079.0[L] 0 + 12806613 12807329 255,0,0 3 187,72,124 0,394,592 chr19 12807007 12807506 CA-CS-19-12807205-12807329.0[L] 0 + 12807007 12807506 255,0,0 3 72,124,88 0,198,411 chr19 12807205 12810208 CA-CS-19-12807418-12807506.0[L] 0 + 12807205 12810208 255,0,0 3 124,88,138 0,213,2865 chr19 12807418 12810404 CA-CS-19-12810070-12810208.0[L] 0 + 12807418 12810404 255,0,0 3 88,138,88 0,2652,2898 chr19 12810070 12813206 CA-CS-19-12810316-12810404.0[L] 0 + 12810070 12813206 255,0,0 3 138,88,124 0,246,3012 chr19 12810316 12813648 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