Mercurial > repos > bioitcore > splicetrap
view db/hg38v3/parallel/chr19_KI270916v1_alt.aa @ 2:01169764d7ca draft
planemo upload
| author | bioitcore |
|---|---|
| date | Thu, 07 Sep 2017 15:20:40 -0400 |
| parents | |
| children |
line wrap: on
line source
chr19_KI270916v1_alt 10167 15555 CA-CS-19_KI270916v1_alt-13382-13676.0[L] 0 - 10167 15555 255,0,0 3 51,294,300 0,3215,5088 chr19_KI270916v1_alt 108038 111710 CA-CS-19_KI270916v1_alt-110831-110867.1[L] 0 - 108038 111710 255,0,0 3 300,36,71 0,2793,3601 chr19_KI270916v1_alt 110778 112159 CA-CS-19_KI270916v1_alt-111628-111934.0[L] 0 + 110778 112159 255,0,0 3 264,306,167 0,850,1214 chr19_KI270916v1_alt 110778 112159 CA-CS-19_KI270916v1_alt-111632-111934.0[L] 0 + 110778 112159 255,0,0 3 197,302,167 0,854,1214 chr19_KI270916v1_alt 113701 115106 CA-CS-19_KI270916v1_alt-114489-114542.1[L] 0 - 113701 115106 255,0,0 3 690,53,102 0,788,1303 chr19_KI270916v1_alt 113703 115106 CA-CS-19_KI270916v1_alt-114489-114542.0[L] 0 - 113703 115106 255,0,0 3 688,53,102 0,786,1301 chr19_KI270916v1_alt 113708 131491 CA-CS-19_KI270916v1_alt-130871-130924.0[L] 0 - 113708 131491 255,0,0 3 683,53,105 0,17163,17678 chr19_KI270916v1_alt 114489 119422 CA-CS-19_KI270916v1_alt-115004-115106.0[L] 0 - 114489 119422 255,0,0 3 53,102,51 0,515,4882 chr19_KI270916v1_alt 115004 115106 IR-IR-19_KI270916v1_alt-115051-115061.0[L] 0 - 115004 115106 255,0,0 3 47,10,45 0,47,57 chr19_KI270916v1_alt 115004 119422 CA-CS-19_KI270916v1_alt-115061-115106.0[L] 0 - 115004 119422 255,0,0 3 47,45,51 0,57,4367 chr19_KI270916v1_alt 115004 122976 CA-CS-19_KI270916v1_alt-119371-119422.0[L] 0 - 115004 122976 255,0,0 3 102,51,294 0,4367,7678 chr19_KI270916v1_alt 115061 122976 CA-CS-19_KI270916v1_alt-119371-119422.1[L] 0 - 115061 122976 255,0,0 3 45,51,294 0,4310,7621 chr19_KI270916v1_alt 119371 124790 CA-CS-19_KI270916v1_alt-122682-122976.0[L] 0 - 119371 124790 255,0,0 3 51,294,300 0,3311,5119 chr19_KI270916v1_alt 122682 127262 CA-CS-19_KI270916v1_alt-124490-124790.0[L] 0 - 122682 127262 255,0,0 3 294,300,36 0,1808,4544 chr19_KI270916v1_alt 124490 128211 CA-CS-19_KI270916v1_alt-127226-127262.0[L] 0 - 124490 128211 255,0,0 3 300,36,41 0,2736,3680 chr19_KI270916v1_alt 124490 128233 CA-CS-19_KI270916v1_alt-127226-127262.1[L] 0 - 124490 128233 255,0,0 3 300,36,63 0,2736,3680 chr19_KI270916v1_alt 124490 128242 CA-CS-19_KI270916v1_alt-127226-127262.2[L] 0 - 124490 128242 255,0,0 3 300,36,72 0,2736,3680 chr19_KI270916v1_alt 130108 130924 AA-AA-19_KI270916v1_alt-130707-130773.0[L] 0 - 130108 130924 255,0,0 3 599,66,53 0,599,763 chr19_KI270916v1_alt 130108 131491 CA-CS-19_KI270916v1_alt-130871-130924.1[L] 0 - 130108 131491 255,0,0 3 599,53,105 0,763,1278 chr19_KI270916v1_alt 130108 131491 CA-CS-19_KI270916v1_alt-130871-130924.2[L] 0 - 130108 131491 255,0,0 3 665,53,105 0,763,1278 chr19_KI270916v1_alt 130871 135808 CA-CS-19_KI270916v1_alt-131386-131491.1[L] 0 - 130871 135808 255,0,0 3 53,105,51 0,515,4886 chr19_KI270916v1_alt 130871 139270 CA-CS-19_KI270916v1_alt-131386-131491.0[L] 0 - 130871 139270 255,0,0 3 53,105,294 0,515,8105 chr19_KI270916v1_alt 131386 139270 CA-CA-19_KI270916v1_alt-135757-135808.1[L] 0 - 131386 139270 255,0,0 3 105,51,294 0,4371,7590 chr19_KI270916v1_alt 131386 141088 CA-CS-19_KI270916v1_alt-138976-139270.1[L] 0 - 131386 141088 255,0,0 3 105,294,300 0,7590,9402 chr19_KI270916v1_alt 131386 143560 CA-CS-19_KI270916v1_alt-135757-135808.1[L] 0 - 131386 143560 255,0,0 3 105,51,36 0,4371,12138 chr19_KI270916v1_alt 13382 17304 CA-CS-19_KI270916v1_alt-15255-15555.0[L] 0 - 13382 17304 255,0,0 3 294,300,285 0,1873,3637 chr19_KI270916v1_alt 135757 139270 CA-CS-19_KI270916v1_alt-138976-139166.1[L] 0 - 135757 139270 255,0,0 3 51,190,82 0,3219,3431 chr19_KI270916v1_alt 135757 141088 CA-CS-19_KI270916v1_alt-138976-139270.0[L] 0 - 135757 141088 255,0,0 3 51,294,300 0,3219,5031 chr19_KI270916v1_alt 135757 143560 CA-CA-19_KI270916v1_alt-138976-139270.0[L] 0 - 135757 143560 255,0,0 3 51,294,36 0,3219,7767 chr19_KI270916v1_alt 135757 144421 CA-CS-19_KI270916v1_alt-143524-143560.3[L] 0 - 135757 144421 255,0,0 3 51,36,69 0,7767,8595 chr19_KI270916v1_alt 138976 139270 IR-IR-19_KI270916v1_alt-139166-139188.0[L] 0 - 138976 139270 255,0,0 3 190,22,82 0,190,212 chr19_KI270916v1_alt 138976 141088 CA-CS-19_KI270916v1_alt-139188-139270.0[L] 0 - 138976 141088 255,0,0 3 190,82,300 0,212,1812 chr19_KI270916v1_alt 138976 143560 CA-CA-19_KI270916v1_alt-140788-141088.0[L] 0 - 138976 143560 255,0,0 3 294,300,36 0,1812,4548 chr19_KI270916v1_alt 138976 144421 CA-CS-19_KI270916v1_alt-143524-143560.0[L] 0 - 138976 144421 255,0,0 3 294,36,69 0,4548,5376 chr19_KI270916v1_alt 139188 143560 CA-CS-19_KI270916v1_alt-140788-141088.0[L] 0 - 139188 143560 255,0,0 3 82,300,36 0,1600,4336 chr19_KI270916v1_alt 140788 144421 CA-CS-19_KI270916v1_alt-143524-143560.1[L] 0 - 140788 144421 255,0,0 3 300,36,69 0,2736,3564 chr19_KI270916v1_alt 140788 144423 CA-CS-19_KI270916v1_alt-143524-143560.2[L] 0 - 140788 144423 255,0,0 3 300,36,71 0,2736,3564 chr19_KI270916v1_alt 140788 144475 CA-CS-19_KI270916v1_alt-143524-143560.4[L] 0 - 140788 144475 255,0,0 3 300,36,123 0,2736,3564 chr19_KI270916v1_alt 146388 147672 CA-CS-19_KI270916v1_alt-147052-147105.0[L] 0 - 146388 147672 255,0,0 3 566,53,105 0,664,1179 chr19_KI270916v1_alt 147052 153433 CA-CS-19_KI270916v1_alt-147567-147672.0[L] 0 - 147052 153433 255,0,0 3 53,105,294 0,515,6087 chr19_KI270916v1_alt 147567 155315 CA-CS-19_KI270916v1_alt-153139-153433.0[L] 0 - 147567 155315 255,0,0 3 105,294,300 0,5572,7448 chr19_KI270916v1_alt 15255 18082 CA-CS-19_KI270916v1_alt-17019-17304.0[L] 0 - 15255 18082 255,0,0 3 300,285,36 0,1764,2791 chr19_KI270916v1_alt 153139 156873 CA-CS-19_KI270916v1_alt-155015-155315.0[L] 0 - 153139 156873 255,0,0 3 294,300,285 0,1876,3449 chr19_KI270916v1_alt 155015 157679 CA-CS-19_KI270916v1_alt-156588-156873.0[L] 0 - 155015 157679 255,0,0 3 300,285,36 0,1573,2628 chr19_KI270916v1_alt 156588 158440 CA-CS-19_KI270916v1_alt-157643-157679.0[L] 0 - 156588 158440 255,0,0 3 285,36,84 0,1055,1768 chr19_KI270916v1_alt 169440 172786 CA-CS-19_KI270916v1_alt-169945-169996.0[L] 0 - 169440 172786 255,0,0 3 357,51,303 0,505,3043 chr19_KI270916v1_alt 169945 173338 CA-CS-19_KI270916v1_alt-172483-172786.0[L] 0 - 169945 173338 255,0,0 3 51,303,297 0,2538,3096 chr19_KI270916v1_alt 17019 18878 CA-CS-19_KI270916v1_alt-18046-18082.0[L] 0 - 17019 18878 255,0,0 3 285,36,67 0,1027,1792 chr19_KI270916v1_alt 172483 173857 CA-CS-19_KI270916v1_alt-173041-173338.0[L] 0 - 172483 173857 255,0,0 3 303,297,310 0,558,1064 chr19_KI270916v1_alt 173041 174291 CA-CS-19_KI270916v1_alt-173547-173857.0[L] 0 - 173041 174291 255,0,0 3 297,310,285 0,506,965 chr19_KI270916v1_alt 173547 174977 CA-CS-19_KI270916v1_alt-174006-174291.0[L] 0 - 173547 174977 255,0,0 3 310,285,523 0,459,907 chr19_KI270916v1_alt 20747 22133 CA-CS-19_KI270916v1_alt-21513-21566.2[L] 0 - 20747 22133 255,0,0 3 668,53,105 0,766,1281 chr19_KI270916v1_alt 2083 3494 CA-CS-19_KI270916v1_alt-2876-2929.0[L] 0 - 2083 3494 255,0,0 3 694,53,105 0,793,1306 chr19_KI270916v1_alt 20856 22075 CA-CS-19_KI270916v1_alt-21513-21566.3[L] 0 - 20856 22075 255,0,0 3 559,53,47 0,657,1172 chr19_KI270916v1_alt 20856 22133 CA-CS-19_KI270916v1_alt-21513-21566.0[L] 0 - 20856 22133 255,0,0 3 559,53,105 0,657,1172 chr19_KI270916v1_alt 2087 21566 CA-CS-19_KI270916v1_alt-20856-21415.1[L] 0 - 2087 21566 255,0,0 3 130,559,53 0,18769,19426 chr19_KI270916v1_alt 2091 21566 CA-CS-19_KI270916v1_alt-20856-21415.0[L] 0 - 2091 21566 255,0,0 3 126,559,53 0,18765,19422 chr19_KI270916v1_alt 21200 22133 CA-CS-19_KI270916v1_alt-21513-21566.1[L] 0 - 21200 22133 255,0,0 3 215,53,105 0,313,828 chr19_KI270916v1_alt 21513 135808 CA-CS-19_KI270916v1_alt-22028-22133.0[L] 0 - 21513 135808 255,0,0 3 53,105,51 0,515,114244 chr19_KI270916v1_alt 21513 139166 CA-CS-19_KI270916v1_alt-22028-22133.1[L] 0 - 21513 139166 255,0,0 3 53,105,190 0,515,117463 chr19_KI270916v1_alt 21513 22133 CA-CS-19_KI270916v1_alt-22028-22075.0[L] 0 - 21513 22133 255,0,0 3 53,47,45 0,515,575 chr19_KI270916v1_alt 21513 26447 CA-CS-19_KI270916v1_alt-22028-22133.2[L] 0 - 21513 26447 255,0,0 3 53,105,51 0,515,4883 chr19_KI270916v1_alt 22028 139166 CA-CA-19_KI270916v1_alt-135757-135808.0[L] 0 - 22028 139166 255,0,0 3 105,51,190 0,113729,116948 chr19_KI270916v1_alt 22028 139270 CA-CS-19_KI270916v1_alt-135757-135808.0[L] 0 - 22028 139270 255,0,0 3 105,51,294 0,113729,116948 chr19_KI270916v1_alt 22028 139270 CA-CS-19_KI270916v1_alt-138976-139166.0[L] 0 - 22028 139270 255,0,0 3 105,190,82 0,116948,117160 chr19_KI270916v1_alt 22028 22133 IR-IR-19_KI270916v1_alt-22075-22088.0[L] 0 - 22028 22133 255,0,0 3 47,13,45 0,47,60 chr19_KI270916v1_alt 22028 26447 CA-CS-19_KI270916v1_alt-22088-22133.0[L] 0 - 22028 26447 255,0,0 3 47,45,51 0,60,4368 chr19_KI270916v1_alt 22028 29895 CA-CS-19_KI270916v1_alt-26396-26447.1[L] 0 - 22028 29895 255,0,0 3 105,51,294 0,4368,7573 chr19_KI270916v1_alt 22028 46356 CA-CS-19_KI270916v1_alt-26396-26447.0[L] 0 - 22028 46356 255,0,0 3 105,51,294 0,4368,24034 chr19_KI270916v1_alt 22088 29895 CA-CS-19_KI270916v1_alt-26396-26447.2[L] 0 - 22088 29895 255,0,0 3 45,51,294 0,4308,7513 chr19_KI270916v1_alt 26396 108338 CA-CS-19_KI270916v1_alt-46062-46356.0[L] 0 - 26396 108338 255,0,0 3 51,294,300 0,19666,81642 chr19_KI270916v1_alt 26396 31720 CA-CS-19_KI270916v1_alt-29601-29895.0[L] 0 - 26396 31720 255,0,0 3 51,294,300 0,3205,5024 chr19_KI270916v1_alt 2876 10218 CA-CS-19_KI270916v1_alt-3389-3494.0[L] 0 - 2876 10218 255,0,0 3 53,105,51 0,513,7291 chr19_KI270916v1_alt 2876 13676 CA-CS-19_KI270916v1_alt-3389-3494.1[L] 0 - 2876 13676 255,0,0 3 53,105,294 0,513,10506 chr19_KI270916v1_alt 29601 110867 CA-CS-19_KI270916v1_alt-31420-31720.1[L] 0 - 29601 110867 255,0,0 3 294,300,36 0,1819,81230 chr19_KI270916v1_alt 29601 34204 CA-CS-19_KI270916v1_alt-31420-31720.0[L] 0 - 29601 34204 255,0,0 3 294,300,36 0,1819,4567 chr19_KI270916v1_alt 31420 111711 CA-CS-19_KI270916v1_alt-110831-110867.0[L] 0 - 31420 111711 255,0,0 3 300,36,72 0,79411,80219 chr19_KI270916v1_alt 31420 35215 CA-CS-19_KI270916v1_alt-34168-34204.0[L] 0 - 31420 35215 255,0,0 3 300,36,47 0,2748,3748 chr19_KI270916v1_alt 3389 13676 CA-CA-19_KI270916v1_alt-10167-10218.0[L] 0 - 3389 13676 255,0,0 3 105,51,294 0,6778,9993 chr19_KI270916v1_alt 3389 15555 CA-CS-19_KI270916v1_alt-13382-13676.1[L] 0 - 3389 15555 255,0,0 3 105,294,300 0,9993,11866 chr19_KI270916v1_alt 33988 35630 CA-CS-19_KI270916v1_alt-34115-34312.0[L] 0 + 33988 35630 255,0,0 3 43,197,469 0,127,1173 chr19_KI270916v1_alt 33988 35630 CA-CS-19_KI270916v1_alt-34115-34383.0[L] 0 + 33988 35630 255,0,0 3 43,268,469 0,127,1173 chr19_KI270916v1_alt 34115 35630 AD-AD-19_KI270916v1_alt-34312-34383.0[L] 0 + 34115 35630 255,0,0 3 197,71,469 0,197,1046 chr19_KI270916v1_alt 37181 38593 CA-CS-19_KI270916v1_alt-37973-38026.0[L] 0 - 37181 38593 255,0,0 3 694,53,105 0,792,1307 chr19_KI270916v1_alt 37973 42909 CA-CS-19_KI270916v1_alt-38488-38593.0[L] 0 - 37973 42909 255,0,0 3 53,105,51 0,515,4885 chr19_KI270916v1_alt 38488 46356 CA-CS-19_KI270916v1_alt-42858-42909.0[L] 0 - 38488 46356 255,0,0 3 105,51,294 0,4370,7574 chr19_KI270916v1_alt 42858 48175 CA-CS-19_KI270916v1_alt-46062-46356.1[L] 0 - 42858 48175 255,0,0 3 51,294,300 0,3204,5017 chr19_KI270916v1_alt 46062 110867 CA-CS-19_KI270916v1_alt-108038-108338.0[L] 0 - 46062 110867 255,0,0 3 294,300,36 0,61976,64769 chr19_KI270916v1_alt 46062 62621 CA-CS-19_KI270916v1_alt-47875-48175.0[L] 0 - 46062 62621 255,0,0 3 294,300,36 0,1813,16523 chr19_KI270916v1_alt 47875 63421 CA-CS-19_KI270916v1_alt-62585-62621.0[L] 0 - 47875 63421 255,0,0 3 300,36,67 0,14710,15479 chr19_KI270916v1_alt 50438 63816 CA-CS-19_KI270916v1_alt-62530-62729.0[L] 0 + 50438 63816 255,0,0 3 40,199,469 0,12092,12909 chr19_KI270916v1_alt 53891 55385 CA-CS-19_KI270916v1_alt-54765-54818.0[L] 0 - 53891 55385 255,0,0 3 774,53,105 0,874,1389 chr19_KI270916v1_alt 53981 54817 CA-CS-19_KI270916v1_alt-54510-54665.0[L] 0 - 53981 54817 255,0,0 3 528,155,52 0,529,784 chr19_KI270916v1_alt 54510 66765 CA-CS-19_KI270916v1_alt-54765-54817.0[L] 0 - 54510 66765 255,0,0 3 155,52,106 0,255,12149 chr19_KI270916v1_alt 54765 58198 CA-CS-19_KI270916v1_alt-55280-55385.0[L] 0 - 54765 58198 255,0,0 3 53,105,51 0,515,3382 chr19_KI270916v1_alt 54765 71096 CA-CS-19_KI270916v1_alt-66659-66765.1[L] 0 - 54765 71096 255,0,0 3 52,106,51 0,11894,16280 chr19_KI270916v1_alt 55280 60663 CA-CS-19_KI270916v1_alt-58147-58198.0[L] 0 - 55280 60663 255,0,0 3 105,51,294 0,2867,5089 chr19_KI270916v1_alt 58147 61823 CA-CS-19_KI270916v1_alt-60369-60663.0[L] 0 - 58147 61823 255,0,0 3 51,294,285 0,2222,3391 chr19_KI270916v1_alt 60369 62621 CA-CS-19_KI270916v1_alt-61538-61823.0[L] 0 - 60369 62621 255,0,0 3 294,285,36 0,1169,2216 chr19_KI270916v1_alt 61538 63388 CA-CS-19_KI270916v1_alt-62585-62621.1[L] 0 - 61538 63388 255,0,0 3 285,36,34 0,1047,1816 chr19_KI270916v1_alt 65475 66765 CA-CS-19_KI270916v1_alt-66146-66197.0[L] 0 - 65475 66765 255,0,0 3 573,51,106 0,671,1184 chr19_KI270916v1_alt 65819 115051 CA-CS-19_KI270916v1_alt-82785-82838.0[L] 0 - 65819 115051 255,0,0 3 229,53,47 0,16966,49185 chr19_KI270916v1_alt 66146 71096 CA-CS-19_KI270916v1_alt-66659-66765.0[L] 0 - 66146 71096 255,0,0 3 51,106,51 0,513,4899 chr19_KI270916v1_alt 66659 74560 CA-CS-19_KI270916v1_alt-71045-71096.0[L] 0 - 66659 74560 255,0,0 3 106,51,294 0,4386,7607 chr19_KI270916v1_alt 71045 76440 CA-CS-19_KI270916v1_alt-74266-74560.0[L] 0 - 71045 76440 255,0,0 3 51,294,300 0,3221,5095 chr19_KI270916v1_alt 74266 78213 CA-CS-19_KI270916v1_alt-76140-76440.0[L] 0 - 74266 78213 255,0,0 3 294,300,285 0,1874,3662 chr19_KI270916v1_alt 74266 78993 CA-CS-19_KI270916v1_alt-76140-76440.1[L] 0 - 74266 78993 255,0,0 3 294,300,36 0,1874,4691 chr19_KI270916v1_alt 74266 80063 CA-CS-19_KI270916v1_alt-76140-76440.2[L] 0 - 74266 80063 255,0,0 3 294,300,71 0,1874,5726 chr19_KI270916v1_alt 76140 78993 CA-CA-19_KI270916v1_alt-77928-78213.0[L] 0 - 76140 78993 255,0,0 3 300,285,36 0,1788,2817 chr19_KI270916v1_alt 76140 80063 CA-CA-19_KI270916v1_alt-78957-78993.0[L] 0 - 76140 80063 255,0,0 3 300,36,71 0,2817,3852 chr19_KI270916v1_alt 77928 80063 CA-CS-19_KI270916v1_alt-78957-78993.1[L] 0 - 77928 80063 255,0,0 3 285,36,71 0,1029,2064 chr19_KI270916v1_alt 77928 80089 CA-CS-19_KI270916v1_alt-78957-78993.0[L] 0 - 77928 80089 255,0,0 3 285,36,97 0,1029,2064 chr19_KI270916v1_alt 82010 83404 CA-CS-19_KI270916v1_alt-82785-82837.0[L] 0 - 82010 83404 255,0,0 3 676,52,105 0,775,1289 chr19_KI270916v1_alt 82010 83404 CA-CS-19_KI270916v1_alt-82785-82838.1[L] 0 - 82010 83404 255,0,0 3 676,53,105 0,775,1289 chr19_KI270916v1_alt 82010 87698 CA-CS-19_KI270916v1_alt-82785-82838.2[L] 0 - 82010 87698 255,0,0 3 676,53,51 0,775,5637 chr19_KI270916v1_alt 82785 115106 CA-CS-19_KI270916v1_alt-115004-115051.0[L] 0 - 82785 115106 255,0,0 3 53,47,45 0,32219,32276 chr19_KI270916v1_alt 82785 83404 AA-AA-19_KI270916v1_alt-82837-82838.0[L] 0 - 82785 83404 255,0,0 3 52,1,105 0,52,514 chr19_KI270916v1_alt 82785 87698 CA-CA-19_KI270916v1_alt-83299-83404.0[L] 0 - 82785 87698 255,0,0 3 53,105,51 0,514,4862 chr19_KI270916v1_alt 82785 87698 CA-CS-19_KI270916v1_alt-83299-83404.0[L] 0 - 82785 87698 255,0,0 3 52,105,51 0,514,4862 chr19_KI270916v1_alt 82785 90580 CA-CS-19_KI270916v1_alt-87647-87698.0[L] 0 - 82785 90580 255,0,0 3 53,51,294 0,4862,7501 chr19_KI270916v1_alt 83299 90580 CA-CS-19_KI270916v1_alt-87647-87698.1[L] 0 - 83299 90580 255,0,0 3 105,51,294 0,4348,6987 chr19_KI270916v1_alt 87647 91744 CA-CS-19_KI270916v1_alt-90286-90580.0[L] 0 - 87647 91744 255,0,0 3 51,294,285 0,2639,3812 chr19_KI270916v1_alt 90286 92646 CA-CS-19_KI270916v1_alt-91459-91744.0[L] 0 - 90286 92646 255,0,0 3 294,285,36 0,1173,2324 chr19_KI270916v1_alt 91459 92925 CA-CS-19_KI270916v1_alt-92610-92646.0[L] 0 - 91459 92925 255,0,0 3 285,36,80 0,1151,1386