Mercurial > repos > bioitcore > splicetrap
view db/hg38v3/parallel/chr19_KI270920v1_alt.aa @ 2:01169764d7ca draft
planemo upload
| author | bioitcore |
|---|---|
| date | Thu, 07 Sep 2017 15:20:40 -0400 |
| parents | |
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chr19_KI270920v1_alt 102944 121288 CA-CS-19_KI270920v1_alt-120966-121163.0[L] 0 - 102944 121288 255,0,0 3 469,197,41 0,18022,18303 chr19_KI270920v1_alt 103309 105474 CA-CS-19_KI270920v1_alt-104409-104445.1[L] 0 + 103309 105474 255,0,0 3 97,36,285 0,1100,1880 chr19_KI270920v1_alt 103335 105474 CA-CS-19_KI270920v1_alt-104409-104445.0[L] 0 + 103335 105474 255,0,0 3 71,36,285 0,1074,1854 chr19_KI270920v1_alt 103335 106887 CA-CA-19_KI270920v1_alt-104409-104445.0[L] 0 + 103335 106887 255,0,0 3 71,36,300 0,1074,3252 chr19_KI270920v1_alt 103335 108733 CA-CS-19_KI270920v1_alt-106587-106887.0[L] 0 + 103335 108733 255,0,0 3 71,300,294 0,3252,5104 chr19_KI270920v1_alt 104409 106887 CA-CA-19_KI270920v1_alt-105189-105474.0[L] 0 + 104409 106887 255,0,0 3 36,285,300 0,780,2178 chr19_KI270920v1_alt 104409 108733 CA-CS-19_KI270920v1_alt-106587-106887.2[L] 0 + 104409 108733 255,0,0 3 36,300,294 0,2178,4030 chr19_KI270920v1_alt 105189 108733 CA-CS-19_KI270920v1_alt-106587-106887.1[L] 0 + 105189 108733 255,0,0 3 285,300,294 0,1398,3250 chr19_KI270920v1_alt 106587 111953 CA-CS-19_KI270920v1_alt-108439-108733.0[L] 0 + 106587 111953 255,0,0 3 300,294,51 0,1852,5315 chr19_KI270920v1_alt 108439 116340 CA-CS-19_KI270920v1_alt-111902-111953.0[L] 0 + 108439 116340 255,0,0 3 294,51,105 0,3463,7796 chr19_KI270920v1_alt 108439 133301 CA-CS-19_KI270920v1_alt-111902-111953.1[L] 0 + 108439 133301 255,0,0 3 294,51,100 0,3463,24762 chr19_KI270920v1_alt 111902 116855 CA-CS-19_KI270920v1_alt-116235-116340.0[L] 0 + 111902 116855 255,0,0 3 51,105,53 0,4333,4900 chr19_KI270920v1_alt 111902 133306 CA-CS-19_KI270920v1_alt-133201-133301.0[L] 0 + 111902 133306 255,0,0 3 51,100,5 0,21299,21399 chr19_KI270920v1_alt 11294 13146 CA-CS-19_KI270920v1_alt-12055-12091.0[L] 0 + 11294 13146 255,0,0 3 84,36,285 0,761,1567 chr19_KI270920v1_alt 11306 29084 CA-CS-19_KI270920v1_alt-26311-26347.3[L] 0 + 11306 29084 255,0,0 3 72,36,300 0,15005,17478 chr19_KI270920v1_alt 11311 60469 CA-CS-19_KI270920v1_alt-57688-57724.1[L] 0 + 11311 60469 255,0,0 3 67,36,297 0,46377,48861 chr19_KI270920v1_alt 11333 29084 CA-CS-19_KI270920v1_alt-26311-26347.2[L] 0 + 11333 29084 255,0,0 3 45,36,300 0,14978,17451 chr19_KI270920v1_alt 116235 117653 CA-CS-19_KI270920v1_alt-116802-116855.0[L] 0 + 116235 117653 255,0,0 3 105,53,680 0,567,738 chr19_KI270920v1_alt 119550 123871 CA-CS-19_KI270920v1_alt-121074-121110.0[L] 0 + 119550 123871 255,0,0 3 123,36,300 0,1524,4021 chr19_KI270920v1_alt 12055 14719 CA-CS-19_KI270920v1_alt-12861-13146.0[L] 0 + 12055 14719 255,0,0 3 36,285,300 0,806,2364 chr19_KI270920v1_alt 121074 125505 CA-CS-19_KI270920v1_alt-123571-123871.1[L] 0 + 121074 125505 255,0,0 3 36,300,82 0,2497,4349 chr19_KI270920v1_alt 121074 125717 CA-CS-19_KI270920v1_alt-123571-123871.0[L] 0 + 121074 125717 255,0,0 3 36,300,294 0,2497,4349 chr19_KI270920v1_alt 123571 125717 CA-CS-19_KI270920v1_alt-125423-125505.0[L] 0 + 123571 125717 255,0,0 3 300,82,190 0,1852,1956 chr19_KI270920v1_alt 123571 128936 CA-CS-19_KI270920v1_alt-125423-125717.0[L] 0 + 123571 128936 255,0,0 3 300,294,51 0,1852,5314 chr19_KI270920v1_alt 125423 125717 IR-IR-19_KI270920v1_alt-125505-125527.0[L] 0 + 125423 125717 255,0,0 3 82,22,190 0,82,104 chr19_KI270920v1_alt 125423 128936 CA-CS-19_KI270920v1_alt-125527-125717.1[L] 0 + 125423 128936 255,0,0 3 82,190,51 0,104,3462 chr19_KI270920v1_alt 125423 133306 CA-CS-19_KI270920v1_alt-125527-125717.0[L] 0 + 125423 133306 255,0,0 3 82,190,105 0,104,7778 chr19_KI270920v1_alt 125423 133306 CA-CS-19_KI270920v1_alt-128885-128936.2[L] 0 + 125423 133306 255,0,0 3 294,51,105 0,3462,7778 chr19_KI270920v1_alt 125527 133306 CA-CA-19_KI270920v1_alt-128885-128936.1[L] 0 + 125527 133306 255,0,0 3 190,51,105 0,3358,7674 chr19_KI270920v1_alt 125527 133821 CA-CS-19_KI270920v1_alt-133201-133306.0[L] 0 + 125527 133821 255,0,0 3 190,105,53 0,7674,8241 chr19_KI270920v1_alt 12861 16591 CA-CS-19_KI270920v1_alt-14419-14719.0[L] 0 + 12861 16591 255,0,0 3 285,300,294 0,1558,3436 chr19_KI270920v1_alt 128885 133821 CA-CS-19_KI270920v1_alt-133201-133306.2[L] 0 + 128885 133821 255,0,0 3 51,105,53 0,4316,4883 chr19_KI270920v1_alt 133201 133306 IR-IR-19_KI270920v1_alt-133301-133301.0[L] 0 + 133201 133306 255,0,0 3 100,0,5 0,100,100 chr19_KI270920v1_alt 133201 133806 CA-CS-19_KI270920v1_alt-133301-133306.0[L] 0 + 133201 133806 255,0,0 3 100,5,38 0,100,567 chr19_KI270920v1_alt 133201 134134 CA-CS-19_KI270920v1_alt-133768-133821.0[L] 0 + 133201 134134 255,0,0 3 105,53,215 0,567,718 chr19_KI270920v1_alt 133201 134148 CA-CS-19_KI270920v1_alt-133768-133821.2[L] 0 + 133201 134148 255,0,0 3 105,53,229 0,567,718 chr19_KI270920v1_alt 133201 134389 CA-CS-19_KI270920v1_alt-133768-133821.4[L] 0 + 133201 134389 255,0,0 3 105,53,470 0,567,718 chr19_KI270920v1_alt 133201 134584 CA-CS-19_KI270920v1_alt-133768-133821.1[L] 0 + 133201 134584 255,0,0 3 105,53,665 0,567,718 chr19_KI270920v1_alt 133201 134587 CA-CS-19_KI270920v1_alt-133768-133821.3[L] 0 + 133201 134587 255,0,0 3 105,53,668 0,567,718 chr19_KI270920v1_alt 133301 133821 CA-CS-19_KI270920v1_alt-133768-133806.0[L] 0 + 133301 133821 255,0,0 3 5,38,13 0,467,507 chr19_KI270920v1_alt 133768 133821 IR-IR-19_KI270920v1_alt-133806-133808.0[L] 0 + 133768 133821 255,0,0 3 38,2,13 0,38,40 chr19_KI270920v1_alt 133768 134389 CA-CS-19_KI270920v1_alt-133808-133821.0[L] 0 + 133768 134389 255,0,0 3 38,13,470 0,40,151 chr19_KI270920v1_alt 133768 153240 CA-CS-19_KI270920v1_alt-133919-134389.1[L] 0 + 133768 153240 255,0,0 3 53,470,224 0,151,19248 chr19_KI270920v1_alt 133808 153119 CA-CS-19_KI270920v1_alt-133919-134389.0[L] 0 + 133808 153119 255,0,0 3 13,470,103 0,111,19208 chr19_KI270920v1_alt 136460 138300 CA-CS-19_KI270920v1_alt-137237-137273.0[L] 0 + 136460 138300 255,0,0 3 67,36,285 0,777,1555 chr19_KI270920v1_alt 137237 140064 CA-CS-19_KI270920v1_alt-138015-138300.0[L] 0 + 137237 140064 255,0,0 3 36,285,300 0,778,2527 chr19_KI270920v1_alt 138015 141937 CA-CS-19_KI270920v1_alt-139764-140064.0[L] 0 + 138015 141937 255,0,0 3 285,300,294 0,1749,3628 chr19_KI270920v1_alt 139764 145154 CA-CS-19_KI270920v1_alt-141643-141937.1[L] 0 + 139764 145154 255,0,0 3 300,294,51 0,1879,5339 chr19_KI270920v1_alt 139764 151933 CA-CS-19_KI270920v1_alt-141643-141937.0[L] 0 + 139764 151933 255,0,0 3 300,294,105 0,1879,12064 chr19_KI270920v1_alt 141643 151933 CA-CA-19_KI270920v1_alt-145103-145154.0[L] 0 + 141643 151933 255,0,0 3 294,51,105 0,3460,10185 chr19_KI270920v1_alt 141643 152446 CA-CS-19_KI270920v1_alt-151828-151933.0[L] 0 + 141643 152446 255,0,0 3 294,105,53 0,10185,10750 chr19_KI270920v1_alt 14419 22162 CA-CS-19_KI270920v1_alt-16297-16591.0[L] 0 + 14419 22162 255,0,0 3 300,294,105 0,1878,7638 chr19_KI270920v1_alt 145103 152446 CA-CS-19_KI270920v1_alt-151828-151933.1[L] 0 + 145103 152446 255,0,0 3 51,105,53 0,6725,7290 chr19_KI270920v1_alt 151828 153239 CA-CS-19_KI270920v1_alt-152393-152446.0[L] 0 + 151828 153239 255,0,0 3 105,53,694 0,565,717 chr19_KI270920v1_alt 160112 171545 CA-CA-19_KI270920v1_alt-161349-161385.0[L] 0 + 160112 171545 255,0,0 3 231,36,291 0,1237,11142 chr19_KI270920v1_alt 160112 174240 CA-CS-19_KI270920v1_alt-171254-171545.2[L] 0 + 160112 174240 255,0,0 3 231,291,214 0,11142,13914 chr19_KI270920v1_alt 160112 174248 CA-CS-19_KI270920v1_alt-171254-171545.0[L] 0 + 160112 174248 255,0,0 3 231,291,222 0,11142,13914 chr19_KI270920v1_alt 160112 174314 CA-CA-19_KI270920v1_alt-171254-171545.0[L] 0 + 160112 174314 255,0,0 3 231,291,288 0,11142,13914 chr19_KI270920v1_alt 160112 177440 CA-CS-19_KI270920v1_alt-171254-171545.5[L] 0 + 160112 177440 255,0,0 3 231,291,1772 0,11142,15556 chr19_KI270920v1_alt 160112 177440 CA-CS-19_KI270920v1_alt-174026-174314.0[L] 0 + 160112 177440 255,0,0 3 231,288,1772 0,13914,15556 chr19_KI270920v1_alt 161349 174248 CA-CS-19_KI270920v1_alt-171254-171545.3[L] 0 + 161349 174248 255,0,0 3 36,291,222 0,9905,12677 chr19_KI270920v1_alt 161349 174314 CA-CS-19_KI270920v1_alt-171254-171545.4[L] 0 + 161349 174314 255,0,0 3 36,291,288 0,9905,12677 chr19_KI270920v1_alt 161349 177440 CA-CS-19_KI270920v1_alt-171254-171545.1[L] 0 + 161349 177440 255,0,0 3 36,291,1772 0,9905,14319 chr19_KI270920v1_alt 16297 22677 CA-CS-19_KI270920v1_alt-22057-22162.0[L] 0 + 16297 22677 255,0,0 3 294,105,53 0,5760,6327 chr19_KI270920v1_alt 171254 177440 CA-CA-19_KI270920v1_alt-174026-174240.0[L] 0 + 171254 177440 255,0,0 3 291,214,1772 0,2772,4414 chr19_KI270920v1_alt 171254 177440 CA-CA-19_KI270920v1_alt-174026-174248.0[L] 0 + 171254 177440 255,0,0 3 291,222,1772 0,2772,4414 chr19_KI270920v1_alt 171254 177440 CA-CA-19_KI270920v1_alt-174026-174314.0[L] 0 + 171254 177440 255,0,0 3 291,288,1772 0,2772,4414 chr19_KI270920v1_alt 174026 177440 AD-AD-19_KI270920v1_alt-174240-174248.0[L] 0 + 174026 177440 255,0,0 3 214,8,1772 0,214,1642 chr19_KI270920v1_alt 174026 177440 AD-AD-19_KI270920v1_alt-174240-174314.0[L] 0 + 174026 177440 255,0,0 3 214,74,1772 0,214,1642 chr19_KI270920v1_alt 174026 177440 AD-AD-19_KI270920v1_alt-174248-174314.0[L] 0 + 174026 177440 255,0,0 3 222,66,1772 0,222,1642 chr19_KI270920v1_alt 192169 192827 CA-CS-19_KI270920v1_alt-192318-192354.1[L] 0 + 192169 192827 255,0,0 3 72,36,285 0,149,373 chr19_KI270920v1_alt 192169 195543 CA-CS-19_KI270920v1_alt-192318-192354.0[L] 0 + 192169 195543 255,0,0 3 72,36,279 0,149,3095 chr19_KI270920v1_alt 192318 195543 CA-CA-19_KI270920v1_alt-192542-192827.0[L] 0 + 192318 195543 255,0,0 3 36,285,279 0,224,2946 chr19_KI270920v1_alt 192318 196085 CA-CS-19_KI270920v1_alt-195264-195543.0[L] 0 + 192318 196085 255,0,0 3 36,279,48 0,2946,3719 chr19_KI270920v1_alt 192542 196085 CA-CS-19_KI270920v1_alt-195264-195543.1[L] 0 + 192542 196085 255,0,0 3 285,279,48 0,2722,3495 chr19_KI270920v1_alt 22057 23341 CA-CS-19_KI270920v1_alt-22624-22677.0[L] 0 + 22057 23341 255,0,0 3 105,53,566 0,567,718 chr19_KI270920v1_alt 22624 23437 CA-CS-19_KI270920v1_alt-22841-22900.0[L] 0 + 22624 23437 255,0,0 3 53,59,532 0,217,281 chr19_KI270920v1_alt 25313 29084 CA-CS-19_KI270920v1_alt-26311-26347.0[L] 0 + 25313 29084 255,0,0 3 71,36,300 0,998,3471 chr19_KI270920v1_alt 25315 29084 CA-CS-19_KI270920v1_alt-26311-26347.4[L] 0 + 25315 29084 255,0,0 3 69,36,300 0,996,3469 chr19_KI270920v1_alt 25315 30893 CA-CS-19_KI270920v1_alt-26311-26347.5[L] 0 + 25315 30893 255,0,0 3 69,36,294 0,996,5284 chr19_KI270920v1_alt 25321 29084 CA-CS-19_KI270920v1_alt-26311-26347.1[L] 0 + 25321 29084 255,0,0 3 63,36,300 0,990,3463 chr19_KI270920v1_alt 26311 128936 CA-CS-19_KI270920v1_alt-30599-30893.0[L] 0 + 26311 128936 255,0,0 3 36,294,51 0,4288,102574 chr19_KI270920v1_alt 26311 30893 CA-CA-19_KI270920v1_alt-28784-29084.0[L] 0 + 26311 30893 255,0,0 3 36,300,294 0,2473,4288 chr19_KI270920v1_alt 26311 47562 CA-CS-19_KI270920v1_alt-28784-29084.0[L] 0 + 26311 47562 255,0,0 3 36,300,294 0,2473,20957 chr19_KI270920v1_alt 28784 128936 CA-CS-19_KI270920v1_alt-30599-30893.4[L] 0 + 28784 128936 255,0,0 3 300,294,51 0,1815,100101 chr19_KI270920v1_alt 28784 133306 CA-CS-19_KI270920v1_alt-30599-30893.1[L] 0 + 28784 133306 255,0,0 3 300,294,105 0,1815,104417 chr19_KI270920v1_alt 28784 34224 CA-CS-19_KI270920v1_alt-30599-30893.3[L] 0 + 28784 34224 255,0,0 3 300,294,51 0,1815,5389 chr19_KI270920v1_alt 28784 50778 CA-CS-19_KI270920v1_alt-47268-47562.1[L] 0 + 28784 50778 255,0,0 3 300,294,51 0,18484,21943 chr19_KI270920v1_alt 28784 65500 CA-CS-19_KI270920v1_alt-30599-30893.2[L] 0 + 28784 65500 255,0,0 3 300,294,51 0,1815,36665 chr19_KI270920v1_alt 30599 133306 CA-CA-19_KI270920v1_alt-128885-128936.0[L] 0 + 30599 133306 255,0,0 3 294,51,105 0,98286,102602 chr19_KI270920v1_alt 30599 133821 CA-CS-19_KI270920v1_alt-133201-133306.1[L] 0 + 30599 133821 255,0,0 3 294,105,53 0,102602,103169 chr19_KI270920v1_alt 30599 38592 CA-CS-19_KI270920v1_alt-34173-34224.0[L] 0 + 30599 38592 255,0,0 3 294,51,105 0,3574,7888 chr19_KI270920v1_alt 30599 69861 CA-CS-19_KI270920v1_alt-65449-65500.1[L] 0 + 30599 69861 255,0,0 3 294,51,102 0,34850,39160 chr19_KI270920v1_alt 34173 39107 CA-CS-19_KI270920v1_alt-38487-38592.0[L] 0 + 34173 39107 255,0,0 3 51,105,53 0,4314,4881 chr19_KI270920v1_alt 38487 39891 CA-CS-19_KI270920v1_alt-39054-39107.0[L] 0 + 38487 39891 255,0,0 3 105,53,686 0,567,718 chr19_KI270920v1_alt 41433 43168 CA-CS-19_KI270920v1_alt-42774-43041.0[L] 0 - 41433 43168 255,0,0 3 470,267,43 0,1341,1692 chr19_KI270920v1_alt 41433 43168 CA-CS-19_KI270920v1_alt-42844-43041.0[L] 0 - 41433 43168 255,0,0 3 469,197,43 0,1411,1692 chr19_KI270920v1_alt 41824 45695 CA-CS-19_KI270920v1_alt-42952-42988.1[L] 0 + 41824 45695 255,0,0 3 71,36,249 0,1128,3622 chr19_KI270920v1_alt 41848 60472 CA-CS-19_KI270920v1_alt-42952-42988.0[L] 0 + 41848 60472 255,0,0 3 47,36,300 0,1104,18324 chr19_KI270920v1_alt 42952 45745 CA-CS-19_KI270920v1_alt-45446-45695.0[L] 0 + 42952 45745 255,0,0 3 36,249,50 0,2494,2743 chr19_KI270920v1_alt 42952 62295 CA-CS-19_KI270920v1_alt-60172-60472.1[L] 0 + 42952 62295 255,0,0 3 36,300,294 0,17220,19049 chr19_KI270920v1_alt 45446 47562 CA-CS-19_KI270920v1_alt-45695-45745.0[L] 0 + 45446 47562 255,0,0 3 249,50,294 0,249,1822 chr19_KI270920v1_alt 45695 50778 CA-CS-19_KI270920v1_alt-47268-47562.0[L] 0 + 45695 50778 255,0,0 3 50,294,51 0,1573,5032 chr19_KI270920v1_alt 47268 53418 CA-CS-19_KI270920v1_alt-50727-50778.0[L] 0 + 47268 53418 255,0,0 3 294,51,105 0,3459,6045 chr19_KI270920v1_alt 50727 53933 CA-CS-19_KI270920v1_alt-53313-53418.0[L] 0 + 50727 53933 255,0,0 3 51,105,53 0,2586,3153 chr19_KI270920v1_alt 53313 54717 CA-CS-19_KI270920v1_alt-53880-53933.1[L] 0 + 53313 54717 255,0,0 3 105,53,686 0,567,718 chr19_KI270920v1_alt 53313 54721 CA-CS-19_KI270920v1_alt-53880-53933.0[L] 0 + 53313 54721 255,0,0 3 105,53,690 0,567,718 chr19_KI270920v1_alt 56261 57777 AD-AD-19_KI270920v1_alt-57509-57580.0[L] 0 - 56261 57777 255,0,0 3 470,71,197 0,1248,1319 chr19_KI270920v1_alt 56261 57904 CA-CS-19_KI270920v1_alt-57509-57777.0[L] 0 - 56261 57904 255,0,0 3 470,268,43 0,1248,1600 chr19_KI270920v1_alt 56261 57904 CA-CS-19_KI270920v1_alt-57580-57777.0[L] 0 - 56261 57904 255,0,0 3 470,197,43 0,1319,1600 chr19_KI270920v1_alt 56652 60472 CA-CS-19_KI270920v1_alt-57688-57724.0[L] 0 + 56652 60472 255,0,0 3 72,36,300 0,1036,3520 chr19_KI270920v1_alt 57688 62295 CA-CS-19_KI270920v1_alt-60172-60469.0[L] 0 + 57688 62295 255,0,0 3 36,297,297 0,2484,4310 chr19_KI270920v1_alt 57688 62295 CA-CS-19_KI270920v1_alt-60172-60472.0[L] 0 + 57688 62295 255,0,0 3 36,300,294 0,2484,4313 chr19_KI270920v1_alt 60172 128936 CA-CS-19_KI270920v1_alt-61998-62295.0[L] 0 + 60172 128936 255,0,0 3 297,297,51 0,1826,68713 chr19_KI270920v1_alt 60172 128936 CA-CS-19_KI270920v1_alt-62001-62295.1[L] 0 + 60172 128936 255,0,0 3 300,294,51 0,1829,68713 chr19_KI270920v1_alt 60172 65500 CA-CS-19_KI270920v1_alt-62001-62295.0[L] 0 + 60172 65500 255,0,0 3 300,294,51 0,1829,5277 chr19_KI270920v1_alt 61998 133306 CA-CS-19_KI270920v1_alt-128885-128936.0[L] 0 + 61998 133306 255,0,0 3 297,51,105 0,66887,71203 chr19_KI270920v1_alt 62001 133306 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