Mercurial > repos > bioitcore > splicetrap
view db/hg38v3/parallel/chr19_KI270923v1_alt.aa @ 2:01169764d7ca draft
planemo upload
| author | bioitcore |
|---|---|
| date | Thu, 07 Sep 2017 15:20:40 -0400 |
| parents | |
| children |
line wrap: on
line source
chr19_KI270923v1_alt 102393 107346 CA-CS-19_KI270923v1_alt-106726-106831.0[L] 0 + 102393 107346 255,0,0 3 51,105,53 0,4333,4900 chr19_KI270923v1_alt 102393 124654 CA-CS-19_KI270923v1_alt-124549-124649.0[L] 0 + 102393 124654 255,0,0 3 51,100,5 0,22156,22256 chr19_KI270923v1_alt 106726 108144 CA-CS-19_KI270923v1_alt-107293-107346.0[L] 0 + 106726 108144 255,0,0 3 105,53,680 0,567,738 chr19_KI270923v1_alt 1096 4442 CA-CS-19_KI270923v1_alt-3886-3937.0[L] 0 + 1096 4442 255,0,0 3 303,51,357 0,2790,2989 chr19_KI270923v1_alt 110041 115241 CA-CS-19_KI270923v1_alt-112444-112480.0[L] 0 + 110041 115241 255,0,0 3 123,36,300 0,2403,4900 chr19_KI270923v1_alt 112444 116874 CA-CS-19_KI270923v1_alt-114941-115241.1[L] 0 + 112444 116874 255,0,0 3 36,300,81 0,2497,4349 chr19_KI270923v1_alt 112444 117065 CA-CS-19_KI270923v1_alt-114941-115241.0[L] 0 + 112444 117065 255,0,0 3 36,300,272 0,2497,4349 chr19_KI270923v1_alt 114941 117065 CA-CS-19_KI270923v1_alt-116793-116874.0[L] 0 + 114941 117065 255,0,0 3 300,81,191 0,1852,1933 chr19_KI270923v1_alt 114941 120284 CA-CS-19_KI270923v1_alt-116793-117065.0[L] 0 + 114941 120284 255,0,0 3 300,272,51 0,1852,5292 chr19_KI270923v1_alt 114941 124654 CA-CS-19_KI270923v1_alt-116793-117065.1[L] 0 + 114941 124654 255,0,0 3 300,272,105 0,1852,9608 chr19_KI270923v1_alt 116793 117065 IR-IR-19_KI270923v1_alt-116874-116874.0[L] 0 + 116793 117065 255,0,0 3 81,0,191 0,81,81 chr19_KI270923v1_alt 116793 120284 CA-CS-19_KI270923v1_alt-116874-117065.0[L] 0 + 116793 120284 255,0,0 3 81,191,51 0,81,3440 chr19_KI270923v1_alt 116793 124654 CA-CA-19_KI270923v1_alt-120233-120284.0[L] 0 + 116793 124654 255,0,0 3 272,51,105 0,3440,7756 chr19_KI270923v1_alt 116793 125169 CA-CS-19_KI270923v1_alt-124549-124654.1[L] 0 + 116793 125169 255,0,0 3 272,105,53 0,7756,8323 chr19_KI270923v1_alt 116874 124654 CA-CS-19_KI270923v1_alt-120233-120284.0[L] 0 + 116874 124654 255,0,0 3 191,51,105 0,3359,7675 chr19_KI270923v1_alt 120233 125169 CA-CS-19_KI270923v1_alt-124549-124654.0[L] 0 + 120233 125169 255,0,0 3 51,105,53 0,4316,4883 chr19_KI270923v1_alt 124549 124654 IR-IR-19_KI270923v1_alt-124649-124649.0[L] 0 + 124549 124654 255,0,0 3 100,0,5 0,100,100 chr19_KI270923v1_alt 124549 125155 CA-CS-19_KI270923v1_alt-124649-124654.0[L] 0 + 124549 125155 255,0,0 3 100,5,39 0,100,567 chr19_KI270923v1_alt 124549 125482 CA-CS-19_KI270923v1_alt-125116-125169.0[L] 0 + 124549 125482 255,0,0 3 105,53,215 0,567,718 chr19_KI270923v1_alt 124549 125496 CA-CS-19_KI270923v1_alt-125116-125169.3[L] 0 + 124549 125496 255,0,0 3 105,53,229 0,567,718 chr19_KI270923v1_alt 124549 125817 CA-CS-19_KI270923v1_alt-125116-125169.1[L] 0 + 124549 125817 255,0,0 3 105,53,550 0,567,718 chr19_KI270923v1_alt 124549 125935 CA-CS-19_KI270923v1_alt-125116-125169.2[L] 0 + 124549 125935 255,0,0 3 105,53,668 0,567,718 chr19_KI270923v1_alt 124649 125169 CA-CS-19_KI270923v1_alt-125116-125155.0[L] 0 + 124649 125169 255,0,0 3 5,39,12 0,467,508 chr19_KI270923v1_alt 125116 125169 IR-IR-19_KI270923v1_alt-125155-125157.0[L] 0 + 125116 125169 255,0,0 3 39,2,12 0,39,41 chr19_KI270923v1_alt 125116 125817 CA-CS-19_KI270923v1_alt-125157-125169.0[L] 0 + 125116 125817 255,0,0 3 39,12,550 0,41,151 chr19_KI270923v1_alt 125116 144582 CA-CS-19_KI270923v1_alt-125267-125817.0[L] 0 + 125116 144582 255,0,0 3 53,550,144 0,151,19322 chr19_KI270923v1_alt 125157 144461 CA-CS-19_KI270923v1_alt-125267-125817.1[L] 0 + 125157 144461 255,0,0 3 12,550,23 0,110,19281 chr19_KI270923v1_alt 127808 129648 CA-CS-19_KI270923v1_alt-128585-128621.0[L] 0 + 127808 129648 255,0,0 3 67,36,285 0,777,1555 chr19_KI270923v1_alt 128585 131412 CA-CS-19_KI270923v1_alt-129363-129648.0[L] 0 + 128585 131412 255,0,0 3 36,285,300 0,778,2527 chr19_KI270923v1_alt 129363 133278 CA-CS-19_KI270923v1_alt-131112-131412.0[L] 0 + 129363 133278 255,0,0 3 285,300,294 0,1749,3621 chr19_KI270923v1_alt 131112 136495 CA-CS-19_KI270923v1_alt-132984-133278.1[L] 0 + 131112 136495 255,0,0 3 300,294,51 0,1872,5332 chr19_KI270923v1_alt 131112 143275 CA-CS-19_KI270923v1_alt-132984-133278.0[L] 0 + 131112 143275 255,0,0 3 300,294,105 0,1872,12058 chr19_KI270923v1_alt 132984 143275 CA-CA-19_KI270923v1_alt-136444-136495.0[L] 0 + 132984 143275 255,0,0 3 294,51,105 0,3460,10186 chr19_KI270923v1_alt 132984 143788 CA-CS-19_KI270923v1_alt-143170-143275.0[L] 0 + 132984 143788 255,0,0 3 294,105,53 0,10186,10751 chr19_KI270923v1_alt 136444 143788 CA-CS-19_KI270923v1_alt-143170-143275.1[L] 0 + 136444 143788 255,0,0 3 51,105,53 0,6726,7291 chr19_KI270923v1_alt 143170 144581 CA-CS-19_KI270923v1_alt-143735-143788.0[L] 0 + 143170 144581 255,0,0 3 105,53,694 0,565,717 chr19_KI270923v1_alt 151459 162892 CA-CA-19_KI270923v1_alt-152696-152732.0[L] 0 + 151459 162892 255,0,0 3 231,36,291 0,1237,11142 chr19_KI270923v1_alt 151459 165587 CA-CS-19_KI270923v1_alt-162601-162892.4[L] 0 + 151459 165587 255,0,0 3 231,291,214 0,11142,13914 chr19_KI270923v1_alt 151459 165595 CA-CS-19_KI270923v1_alt-162601-162892.2[L] 0 + 151459 165595 255,0,0 3 231,291,222 0,11142,13914 chr19_KI270923v1_alt 151459 165661 CA-CA-19_KI270923v1_alt-162601-162892.0[L] 0 + 151459 165661 255,0,0 3 231,291,288 0,11142,13914 chr19_KI270923v1_alt 151459 168787 CA-CS-19_KI270923v1_alt-162601-162892.5[L] 0 + 151459 168787 255,0,0 3 231,291,1772 0,11142,15556 chr19_KI270923v1_alt 151459 168787 CA-CS-19_KI270923v1_alt-165373-165661.0[L] 0 + 151459 168787 255,0,0 3 231,288,1772 0,13914,15556 chr19_KI270923v1_alt 152696 165595 CA-CS-19_KI270923v1_alt-162601-162892.1[L] 0 + 152696 165595 255,0,0 3 36,291,222 0,9905,12677 chr19_KI270923v1_alt 152696 165661 CA-CS-19_KI270923v1_alt-162601-162892.3[L] 0 + 152696 165661 255,0,0 3 36,291,288 0,9905,12677 chr19_KI270923v1_alt 152696 168787 CA-CS-19_KI270923v1_alt-162601-162892.0[L] 0 + 152696 168787 255,0,0 3 36,291,1772 0,9905,14319 chr19_KI270923v1_alt 15479 49423 CA-CS-19_KI270923v1_alt-46651-46687.1[L] 0 + 15479 49423 255,0,0 3 47,36,300 0,31172,33644 chr19_KI270923v1_alt 15481 49423 CA-CS-19_KI270923v1_alt-46651-46687.0[L] 0 + 15481 49423 255,0,0 3 45,36,300 0,31170,33642 chr19_KI270923v1_alt 162601 168787 CA-CA-19_KI270923v1_alt-165373-165587.0[L] 0 + 162601 168787 255,0,0 3 291,214,1772 0,2772,4414 chr19_KI270923v1_alt 162601 168787 CA-CA-19_KI270923v1_alt-165373-165595.0[L] 0 + 162601 168787 255,0,0 3 291,222,1772 0,2772,4414 chr19_KI270923v1_alt 162601 168787 CA-CA-19_KI270923v1_alt-165373-165661.0[L] 0 + 162601 168787 255,0,0 3 291,288,1772 0,2772,4414 chr19_KI270923v1_alt 165373 168787 AD-AD-19_KI270923v1_alt-165587-165595.0[L] 0 + 165373 168787 255,0,0 3 214,8,1772 0,214,1642 chr19_KI270923v1_alt 165373 168787 AD-AD-19_KI270923v1_alt-165587-165661.0[L] 0 + 165373 168787 255,0,0 3 214,74,1772 0,214,1642 chr19_KI270923v1_alt 165373 168787 AD-AD-19_KI270923v1_alt-165595-165661.0[L] 0 + 165373 168787 255,0,0 3 222,66,1772 0,222,1642 chr19_KI270923v1_alt 183516 184174 CA-CS-19_KI270923v1_alt-183665-183701.1[L] 0 + 183516 184174 255,0,0 3 72,36,285 0,149,373 chr19_KI270923v1_alt 183516 186890 CA-CS-19_KI270923v1_alt-183665-183701.0[L] 0 + 183516 186890 255,0,0 3 72,36,279 0,149,3095 chr19_KI270923v1_alt 183665 186890 CA-CA-19_KI270923v1_alt-183889-184174.0[L] 0 + 183665 186890 255,0,0 3 36,285,279 0,224,2946 chr19_KI270923v1_alt 183665 187432 CA-CS-19_KI270923v1_alt-186611-186890.1[L] 0 + 183665 187432 255,0,0 3 36,279,48 0,2946,3719 chr19_KI270923v1_alt 183889 187432 CA-CS-19_KI270923v1_alt-186611-186890.0[L] 0 + 183889 187432 255,0,0 3 285,279,48 0,2722,3495 chr19_KI270923v1_alt 25 1399 CA-CS-19_KI270923v1_alt-546-843.0[L] 0 + 25 1399 255,0,0 3 312,297,303 0,521,1071 chr19_KI270923v1_alt 29437 33124 CA-CS-19_KI270923v1_alt-30352-30388.0[L] 0 + 29437 33124 255,0,0 3 123,36,300 0,915,3387 chr19_KI270923v1_alt 29489 33124 CA-CS-19_KI270923v1_alt-30352-30388.2[L] 0 + 29489 33124 255,0,0 3 71,36,300 0,863,3335 chr19_KI270923v1_alt 29491 33124 CA-CS-19_KI270923v1_alt-30352-30388.5[L] 0 + 29491 33124 255,0,0 3 69,36,300 0,861,3333 chr19_KI270923v1_alt 29491 34936 CA-CS-19_KI270923v1_alt-30352-30388.1[L] 0 + 29491 34936 255,0,0 3 69,36,294 0,861,5151 chr19_KI270923v1_alt 29491 38156 CA-CS-19_KI270923v1_alt-30352-30388.3[L] 0 + 29491 38156 255,0,0 3 69,36,51 0,861,8614 chr19_KI270923v1_alt 29493 33124 CA-CS-19_KI270923v1_alt-30352-30388.4[L] 0 + 29493 33124 255,0,0 3 67,36,300 0,859,3331 chr19_KI270923v1_alt 30352 34724 CA-CS-19_KI270923v1_alt-32824-33124.1[L] 0 + 30352 34724 255,0,0 3 36,300,82 0,2472,4290 chr19_KI270923v1_alt 30352 34936 CA-CA-19_KI270923v1_alt-32824-33124.0[L] 0 + 30352 34936 255,0,0 3 36,300,294 0,2472,4290 chr19_KI270923v1_alt 30352 38156 CA-CA-19_KI270923v1_alt-34642-34936.0[L] 0 + 30352 38156 255,0,0 3 36,294,51 0,4290,7753 chr19_KI270923v1_alt 30352 42527 CA-CS-19_KI270923v1_alt-38105-38156.0[L] 0 + 30352 42527 255,0,0 3 36,51,105 0,7753,12070 chr19_KI270923v1_alt 30352 51231 CA-CS-19_KI270923v1_alt-32824-33124.0[L] 0 + 30352 51231 255,0,0 3 36,300,294 0,2472,20585 chr19_KI270923v1_alt 32824 120284 CA-CS-19_KI270923v1_alt-50937-51231.0[L] 0 + 32824 120284 255,0,0 3 300,294,51 0,18113,87409 chr19_KI270923v1_alt 32824 34936 CA-CS-19_KI270923v1_alt-34642-34724.0[L] 0 + 32824 34936 255,0,0 3 300,82,190 0,1818,1922 chr19_KI270923v1_alt 32824 38156 CA-CS-19_KI270923v1_alt-34642-34936.0[L] 0 + 32824 38156 255,0,0 3 300,294,51 0,1818,5281 chr19_KI270923v1_alt 32824 42527 CA-CS-19_KI270923v1_alt-34642-34936.1[L] 0 + 32824 42527 255,0,0 3 300,294,105 0,1818,9598 chr19_KI270923v1_alt 34642 34936 IR-IR-19_KI270923v1_alt-34724-34746.0[L] 0 + 34642 34936 255,0,0 3 82,22,190 0,82,104 chr19_KI270923v1_alt 34642 42527 CA-CA-19_KI270923v1_alt-38105-38156.0[L] 0 + 34642 42527 255,0,0 3 294,51,105 0,3463,7780 chr19_KI270923v1_alt 34642 42527 CA-CS-19_KI270923v1_alt-34746-34936.0[L] 0 + 34642 42527 255,0,0 3 82,190,105 0,104,7780 chr19_KI270923v1_alt 34642 43042 CA-CS-19_KI270923v1_alt-42422-42527.2[L] 0 + 34642 43042 255,0,0 3 294,105,53 0,7780,8347 chr19_KI270923v1_alt 34746 43042 CA-CS-19_KI270923v1_alt-42422-42527.0[L] 0 + 34746 43042 255,0,0 3 190,105,53 0,7676,8243 chr19_KI270923v1_alt 38105 43042 CA-CS-19_KI270923v1_alt-42422-42527.1[L] 0 + 38105 43042 255,0,0 3 51,105,53 0,4317,4884 chr19_KI270923v1_alt 42422 43805 CA-CS-19_KI270923v1_alt-42989-43042.2[L] 0 + 42422 43805 255,0,0 3 105,53,665 0,567,718 chr19_KI270923v1_alt 42422 43805 CA-CS-19_KI270923v1_alt-42989-43042.3[L] 0 + 42422 43805 255,0,0 3 105,53,599 0,567,784 chr19_KI270923v1_alt 42422 43808 CA-CS-19_KI270923v1_alt-42989-43042.0[L] 0 + 42422 43808 255,0,0 3 105,53,668 0,567,718 chr19_KI270923v1_alt 42422 60212 CA-CS-19_KI270923v1_alt-42989-43042.1[L] 0 + 42422 60212 255,0,0 3 105,53,683 0,567,17107 chr19_KI270923v1_alt 42989 43805 AA-AA-19_KI270923v1_alt-43140-43206.0[L] 0 + 42989 43805 255,0,0 3 53,66,599 0,151,217 chr19_KI270923v1_alt 45671 49423 CA-CS-19_KI270923v1_alt-46651-46687.3[L] 0 + 45671 49423 255,0,0 3 72,36,300 0,980,3452 chr19_KI270923v1_alt 45680 49423 CA-CS-19_KI270923v1_alt-46651-46687.2[L] 0 + 45680 49423 255,0,0 3 63,36,300 0,971,3443 chr19_KI270923v1_alt 46651 51231 CA-CS-19_KI270923v1_alt-49123-49423.0[L] 0 + 46651 51231 255,0,0 3 36,300,294 0,2472,4286 chr19_KI270923v1_alt 49123 120284 CA-CS-19_KI270923v1_alt-50937-51231.1[L] 0 + 49123 120284 255,0,0 3 300,294,51 0,1814,71110 chr19_KI270923v1_alt 49123 54549 CA-CS-19_KI270923v1_alt-50937-51231.2[L] 0 + 49123 54549 255,0,0 3 300,294,51 0,1814,5375 chr19_KI270923v1_alt 50937 124654 CA-CS-19_KI270923v1_alt-120233-120284.1[L] 0 + 50937 124654 255,0,0 3 294,51,105 0,69296,73612 chr19_KI270923v1_alt 50937 58916 CA-CS-19_KI270923v1_alt-54498-54549.0[L] 0 + 50937 58916 255,0,0 3 294,51,102 0,3561,7877 chr19_KI270923v1_alt 54498 59431 CA-CS-19_KI270923v1_alt-58814-58916.0[L] 0 + 54498 59431 255,0,0 3 51,102,53 0,4316,4880 chr19_KI270923v1_alt 546 3937 CA-CS-19_KI270923v1_alt-1096-1399.0[L] 0 + 546 3937 255,0,0 3 297,303,51 0,550,3340 chr19_KI270923v1_alt 58814 60217 CA-CS-19_KI270923v1_alt-59378-59431.0[L] 0 + 58814 60217 255,0,0 3 102,53,688 0,564,715 chr19_KI270923v1_alt 58814 60219 CA-CS-19_KI270923v1_alt-59378-59431.1[L] 0 + 58814 60219 255,0,0 3 102,53,690 0,564,715 chr19_KI270923v1_alt 61761 112533 CA-CS-19_KI270923v1_alt-93469-93907.0[L] 0 - 61761 112533 255,0,0 3 31,438,197 0,31708,50575 chr19_KI270923v1_alt 61761 112533 CA-CS-19_KI270923v1_alt-93469-93907.1[L] 0 - 61761 112533 255,0,0 3 31,438,268 0,31708,50504 chr19_KI270923v1_alt 80977 82443 CA-CS-19_KI270923v1_alt-81256-81292.0[L] 0 + 80977 82443 255,0,0 3 80,36,285 0,279,1181 chr19_KI270923v1_alt 81256 83610 CA-CS-19_KI270923v1_alt-82158-82443.0[L] 0 + 81256 83610 255,0,0 3 36,285,294 0,902,2060 chr19_KI270923v1_alt 82158 86249 CA-CS-19_KI270923v1_alt-83316-83610.0[L] 0 + 82158 86249 255,0,0 3 285,294,51 0,1158,4040 chr19_KI270923v1_alt 83316 90589 CA-CS-19_KI270923v1_alt-86198-86249.1[L] 0 + 83316 90589 255,0,0 3 294,51,99 0,2882,7174 chr19_KI270923v1_alt 83316 90594 CA-CS-19_KI270923v1_alt-86198-86249.0[L] 0 + 83316 90594 255,0,0 3 294,51,104 0,2882,7174 chr19_KI270923v1_alt 83316 91108 CA-CS-19_KI270923v1_alt-86198-86249.2[L] 0 + 83316 91108 255,0,0 3 294,51,53 0,2882,7739 chr19_KI270923v1_alt 86198 90594 CA-CS-19_KI270923v1_alt-90490-90589.0[L] 0 + 86198 90594 255,0,0 3 51,99,5 0,4292,4391 chr19_KI270923v1_alt 86198 91108 CA-CA-19_KI270923v1_alt-90490-90594.0[L] 0 + 86198 91108 255,0,0 3 51,104,53 0,4292,4857 chr19_KI270923v1_alt 86198 91883 CA-CS-19_KI270923v1_alt-91055-91108.1[L] 0 + 86198 91883 255,0,0 3 51,53,676 0,4857,5009 chr19_KI270923v1_alt 90490 90594 IR-IR-19_KI270923v1_alt-90589-90589.0[L] 0 + 90490 90594 255,0,0 3 99,0,5 0,99,99 chr19_KI270923v1_alt 90490 91108 CA-CS-19_KI270923v1_alt-90589-90594.0[L] 0 + 90490 91108 255,0,0 3 99,5,53 0,99,565 chr19_KI270923v1_alt 90490 91883 CA-CS-19_KI270923v1_alt-91055-91108.0[L] 0 + 90490 91883 255,0,0 3 104,53,676 0,565,717 chr19_KI270923v1_alt 90589 91883 CA-CS-19_KI270923v1_alt-91055-91108.2[L] 0 + 90589 91883 255,0,0 3 5,53,676 0,466,618 chr19_KI270923v1_alt 93469 112533 AD-AD-19_KI270923v1_alt-112265-112336.0[L] 0 - 93469 112533 255,0,0 3 438,71,197 0,18796,18867 chr19_KI270923v1_alt 93469 112658 CA-CS-19_KI270923v1_alt-112265-112533.0[L] 0 - 93469 112658 255,0,0 3 438,268,41 0,18796,19148 chr19_KI270923v1_alt 93469 112658 CA-CS-19_KI270923v1_alt-112336-112533.0[L] 0 - 93469 112658 255,0,0 3 438,197,41 0,18867,19148 chr19_KI270923v1_alt 93803 95965 CA-CS-19_KI270923v1_alt-94899-94935.1[L] 0 + 93803 95965 255,0,0 3 97,36,285 0,1096,1877 chr19_KI270923v1_alt 93829 95965 CA-CS-19_KI270923v1_alt-94899-94935.0[L] 0 + 93829 95965 255,0,0 3 71,36,285 0,1070,1851 chr19_KI270923v1_alt 93829 97378 CA-CA-19_KI270923v1_alt-94899-94935.0[L] 0 + 93829 97378 255,0,0 3 71,36,300 0,1070,3249 chr19_KI270923v1_alt 93829 99224 CA-CS-19_KI270923v1_alt-97078-97378.2[L] 0 + 93829 99224 255,0,0 3 71,300,294 0,3249,5101 chr19_KI270923v1_alt 94899 97378 CA-CA-19_KI270923v1_alt-95680-95965.0[L] 0 + 94899 97378 255,0,0 3 36,285,300 0,781,2179 chr19_KI270923v1_alt 94899 99224 CA-CS-19_KI270923v1_alt-97078-97378.1[L] 0 + 94899 99224 255,0,0 3 36,300,294 0,2179,4031 chr19_KI270923v1_alt 95680 99224 CA-CS-19_KI270923v1_alt-97078-97378.0[L] 0 + 95680 99224 255,0,0 3 285,300,294 0,1398,3250 chr19_KI270923v1_alt 97078 102444 CA-CS-19_KI270923v1_alt-98930-99224.0[L] 0 + 97078 102444 255,0,0 3 300,294,51 0,1852,5315 chr19_KI270923v1_alt 98930 106831 CA-CS-19_KI270923v1_alt-102393-102444.0[L] 0 + 98930 106831 255,0,0 3 294,51,105 0,3463,7796 chr19_KI270923v1_alt 98930 124649 CA-CS-19_KI270923v1_alt-102393-102444.1[L] 0 + 98930 124649 255,0,0 3 294,51,100 0,3463,25619