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comparison IMSAME/src/Makefile @ 0:762009a91895 draft

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author bitlab
date Sat, 15 Dec 2018 18:04:10 -0500
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-1:000000000000 0:762009a91895
1 CC=gcc
2 CXX=g++
3 CFLAGS=-O3 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wall #-DVERBOSE
4 BIN=../bin
5
6 all: IMSAME revcomp combine covident
7
8
9
10 IMSAME: IMSAME.c
11 $(CC) $(CFLAGS) alignmentFunctions.c -lpthread -lm commonFunctions.c -msse -lm IMSAME.c -lpthread -lm -o $(BIN)/IMSAME
12
13 revcomp: reverseComplement.c
14 $(CC) $(CFLAGS) commonFunctions.c -lm reverseComplement.c -o $(BIN)/revComp
15
16 combine: combine_reads.c
17 $(CC) $(CFLAGS) commonFunctions.c -lm combine_reads.c -o $(BIN)/combine
18
19 covident: covident.c
20 $(CC) $(CFLAGS) covident.c -o $(BIN)/combine
21
22 clean:
23 rm -rf $(BIN)/IMSAME $(BIN)/revComp $(BIN)/combine