Mercurial > repos > blankenberg > naive_variant_caller

comparison tools/naive_variant_caller.xml @ 13:cfc86c3fc5c8 draft

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planemo upload for repository https://github.com/blankenberg/tools-blankenberg/tree/master/tools/naive_variant_caller commit 470c2ac7bfb061e09dfe88ea61d2b8b53d041413
author blankenberg
date Fri, 17 Feb 2017 11:42:07 -0500
parents ac0235d2d459
children
comparison
equal deleted inserted replaced
12:ac0235d2d459 13:cfc86c3fc5c8
197 | uint32 | 4,294,967,295 | 197 | uint32 | 4,294,967,295 |
198 +--------+----------------------------+ 198 +--------+----------------------------+
199 | uint64 | 18,446,744,073,709,551,615 | 199 | uint64 | 18,446,744,073,709,551,615 |
200 +--------+----------------------------+ 200 +--------+----------------------------+
201 201
202 ------
203
204 **Citation**
205
206 If you use this tool, please cite Blankenberg D, et al. *In preparation.*
207 202
208 </help> 203 </help>
209 <tests> 204 <tests>
210 <test> 205 <test>
211 <param name="reference_source_selector" value="history" /> 206 <param name="reference_source_selector" value="history" />
221 <param name="advanced_options_selector" value="advanced" /> 216 <param name="advanced_options_selector" value="advanced" />
222 <param name="coverage_dtype" value="uint8" /> 217 <param name="coverage_dtype" value="uint8" />
223 <output name="output_vcf" file="fake_phiX174_reads_1_test_out_1.vcf" compare="contains" /> 218 <output name="output_vcf" file="fake_phiX174_reads_1_test_out_1.vcf" compare="contains" />
224 </test> 219 </test>
225 </tests> 220 </tests>
226 221
222 <citations>
223 <citation type="doi">10.1186/gb4161</citation>
224 </citations>
225
227 </tool> 226 </tool>