Mercurial > repos > blankenberg > naive_variant_caller
diff tools/naive_variant_caller.xml @ 11:8af4e7a4d041
Add upgrade recommended message.
author | Daniel Blankenberg <dan@bx.psu.edu> |
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date | Thu, 17 Sep 2015 14:22:52 -0400 |
parents | 4fab5fce1adb |
children | ac0235d2d459 |
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--- a/tools/naive_variant_caller.xml Tue Mar 31 11:19:47 2015 -0400 +++ b/tools/naive_variant_caller.xml Thu Sep 17 14:22:52 2015 -0400 @@ -122,6 +122,12 @@ <data format="vcf" name="output_vcf" /> </outputs> <help> +.. class:: warningmark + +Upgrading to version 0.0.2 is recommended. + +------ + **What it does** This tool is a naive variant caller that processes aligned sequencing reads from the BAM format and produces a VCF file containing per position variant calls. This tool allows multiple BAM files to be provided as input and utilizes read group information to make calls for individual samples.