# HG changeset patch # User blankenberg # Date 1519851712 18000 # Node ID aff38ea879f1969fa1c514189323de8e494ca2e0 # Parent 5c852eca82e036e32cece1325d7ea2c0e68b1dcc planemo upload for repository https://github.com/blankenberg/tools-blankenberg/tree/master/tools/naive_variant_caller commit dfca863a9a361877d6d98b92072f1ebc316c5767 diff -r 5c852eca82e0 -r aff38ea879f1 naive_variant_caller.xml --- a/naive_variant_caller.xml Wed Feb 28 15:54:57 2018 -0500 +++ b/naive_variant_caller.xml Wed Feb 28 16:01:52 2018 -0500 @@ -1,4 +1,4 @@ - + - tabulate variable sites from BAM datasets nvc @@ -147,6 +147,10 @@ +The **Naive Variant Caller** tool (NVC). + +------ + **What it does** This tool is a naive variant caller that processes aligned sequencing reads from the BAM format and produces a VCF file containing per position variant calls. This tool allows multiple BAM files to be provided as input and utilizes read group information to make calls for individual samples.