Mercurial > repos > blankenberg > package_pybamparser_0_0_1

diff tool_dependencies.xml @ 0:ae1828dd8bbc

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Create package_pybamparser_0_0_1
author blankenberg
date Thu, 29 Aug 2013 09:35:47 -0400
parents
children 0b2c2790838a
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Aug 29 09:35:47 2013 -0400
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+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="pyBamParser" version="0.0.1">
+        <install version="1.0">
+            <actions>
+                <action type="shell_command">hg clone -r 76d75ab3475f8136d75c8f9a11e1e805bf3c857c https://bitbucket.org/dan/pybamparser pyBamParser</action>
+                <action type="make_directory">$INSTALL_DIR/lib/python</action>
+                <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action> 
+                <action type="set_environment">
+                    <environment_variable name="PYTHONPATH" action="append_to">$INSTALL_DIR/lib/python</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+Installs pyBamParser libraries.
+        </readme>
+    </package>
+</tool_dependency>