Mercurial > repos > blankenberg > package_pybamtools_0_0_1

comparison tool_dependencies.xml @ 5:102e3710dbdc

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Update clone
author Daniel Blankenberg <dan@bx.psu.edu>
date Wed, 05 Feb 2014 12:19:05 -0500
parents b97259dc9149
children 84ac1c74b371
comparison
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4:b97259dc9149 5:102e3710dbdc
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="pyBamTools" version="0.0.1"> 3 <package name="pyBamTools" version="0.0.1">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="shell_command">hg clone -r 2f0e7841b3b65c4e8f65d02b300dcc28c10ebe26 https://bitbucket.org/dan/pybamtools pyBamTools</action> 6 <action type="shell_command">hg clone -r f46910687c3c1876f180e3e676e020d082c06f01 https://bitbucket.org/dan/pybamtools pyBamTools</action>
7 <action type="make_directory">$INSTALL_DIR/lib/python</action> 7 <action type="make_directory">$INSTALL_DIR/lib/python</action>
8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action> 8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action>
9 <action type="set_environment"> 9 <action type="set_environment">
10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable> 10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
11 </action> 11 </action>