Mercurial > repos > blankenberg > package_pybamtools_0_0_1

comparison tool_dependencies.xml @ 7:d8bf3de88dcf

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Update clone command.
author Daniel Blankenberg <dan@bx.psu.edu>
date Thu, 13 Mar 2014 18:34:42 -0400
parents 84ac1c74b371
children b6217f6ab3b5
comparison
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6:84ac1c74b371 7:d8bf3de88dcf
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="pyBamTools" version="0.0.1"> 3 <package name="pyBamTools" version="0.0.1">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="shell_command">hg clone -r ddb06d19f47dcfef5410591628447c2385e4432c https://bitbucket.org/dan/pybamtools pyBamTools</action> 6 <action type="shell_command">hg clone -r 419eeb9540456a81dc4290c0721baa9cb644126f https://bitbucket.org/dan/pybamtools pyBamTools</action>
7 <action type="make_directory">$INSTALL_DIR/lib/python</action> 7 <action type="make_directory">$INSTALL_DIR/lib/python</action>
8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action> 8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action>
9 <action type="set_environment"> 9 <action type="set_environment">
10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable> 10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
11 </action> 11 </action>