Mercurial > repos > bornea > query_crapome

comparison CRAPomeQuery.xml @ 10:becf7fd6d908 draft

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author bornea
date Tue, 19 Apr 2016 11:16:44 -0400
parents 9c72c51d858d
children 659644782ecd
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9:f561ac1afa70 10:becf7fd6d908
38 Query CRAPome 38 Query CRAPome
39 ------------- 39 -------------
40 This program will read in a SAINT formatted *Prey* file or a single column list (no column name) of Uniprot accessions (e.g. "P00533" or "EGFR_HUMAN"), query the CRAPome database (v1.1) http://crapome.org, and return a file specifying the prevalence of each protein in the CRAPome. 40 This program will read in a SAINT formatted *Prey* file or a single column list (no column name) of Uniprot accessions (e.g. "P00533" or "EGFR_HUMAN"), query the CRAPome database (v1.1) http://crapome.org, and return a file specifying the prevalence of each protein in the CRAPome.
41 41
42 **1) Input File** 42 **1) Input File**
43
44 SAINT formatted *Prey* file or a single column list (no column name) of Uniprot accessions. 43 SAINT formatted *Prey* file or a single column list (no column name) of Uniprot accessions.
45 44
46 **2) Species** 45 **2) Species**
47
48 Please specify species. Supported species are Human and Yeast. 46 Please specify species. Supported species are Human and Yeast.
49 </help> 47 </help>
50 </tool> 48 </tool>