Mercurial > repos > bornea > saint_preprocessing

annotate test_files/scaffold_EGFR.txt @ 38:a7a479d8cbf8 draft

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author bornea
date Thu, 19 May 2016 10:28:23 -0400
parents 843ee18d6065
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1
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1 EGFR_TAP, Samples report created on 12/08/2015
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2 Experiment: EGFR_TAP
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3 Peak List Generator: unknown
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4 Version: unknown
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5 Charge States Calculated: unknown
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6 Deisotoped: unknown
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7 Textual Annotation: unknown
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8 Database Set: 1 Database
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9 Database Name: the SwissProt_2015_09 database
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10 Version: unknown
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11 Taxonomy: Homo sapiens
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12 Number of Proteins: 20205
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13 Does database contain common contaminants?: unknown
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14 Search Engine Set: 1 Search Engine
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15 Search Engine: Mascot
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16 Version: 2.4.1
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17 Samples: All Samples
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18 Fragment Tolerance: 0.80 Da (Monoisotopic)
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19 Parent Tolerance: 1.2 Da (Monoisotopic)
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20 Fixed Modifications:
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21 Variable Modifications: +16 on M (Oxidation), +57 on C (Carbamidomethyl)
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22 Database: the SwissProt_2015_09 database (selected for Homo sapiens, unknown version, 20205 entries)
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23 Digestion Enzyme: Trypsin
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24 Max Missed Cleavages: 2
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25 Probability Model:
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26 04112012_JL_HCC827_EGFR_TAP_1_run1.RAW (F001988): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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27 04112012_JL_HCC827_EGFR_TAP_1_run2.RAW (F001989): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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28 04112012_JL_HCC827_EGFR_TAP_2_run1.RAW (F001990): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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29 04112012_JL_HCC827_EGFR_TAP_2_run2.RAW (F001991): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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30 04112012_JL_HCC827_ERBB3_TAP_1_run1.RAW (F001992): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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31 04112012_JL_HCC827_ERBB3_TAP_1_run2.RAW (F001993): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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32 04112012_JL_HCC827_ERBB3_TAP_2_run1.RAW (F001994): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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33 04112012_JL_HCC827_ERBB3_TAP_2_run2.RAW (F001995): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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34 04112012_JL_HCC827_GFP_TAP_1_run1.RAW (F001996): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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35 04112012_JL_HCC827_GFP_TAP_1_run2.RAW (F001997): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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36 04112012_JL_HCC827_GFP_TAP_2_run1.RAW (F001998): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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37 04112012_JL_HCC827_GFP_TAP_2_run2.RAW (F001999): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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38 04112012_JL_HCC827_GRB2_TAP_1_run1.RAW (F002000): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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39 04112012_JL_HCC827_GRB2_TAP_1_run2.RAW (F002001): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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40 04112012_JL_HCC827_GRB2_TAP_2_run1.RAW (F002002): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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41 04112012_JL_HCC827_GRB2_TAP_2_run2.RAW (F002003_1): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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42 04112012_JL_HCC827_P85B_TAP_1_run1.RAW (F002004): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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43 04112012_JL_HCC827_P85B_TAP_1_run2.RAW (F002005): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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44 04112012_JL_HCC827_P85B_TAP_2_run1.RAW (F002006): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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45 04112012_JL_HCC827_P85B_TAP_2_run2.RAW (F002007): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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46 04112012_JL_HCC827ER_EGFR_TAP_1_run1.RAW (F002008): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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47 04112012_JL_HCC827ER_EGFR_TAP_1_run2.RAW (F002009): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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48 04112012_JL_HCC827ER_EGFR_TAP_2_run1.RAW (F002010): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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49 04112012_JL_HCC827ER_EGFR_TAP_2_run2.RAW (F002011): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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50 04112012_JL_HCC827ER_ERBB3_TAP_1_run1.RAW (F002012): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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51 04112012_JL_HCC827ER_ERBB3_TAP_1_run2.RAW (F002013): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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52 04112012_JL_HCC827ER_ERBB3_TAP_2_run1.RAW (F002014): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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53 04112012_JL_HCC827ER_ERBB3_TAP_2_run2.RAW (F002015): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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54 04112012_JL_HCC827ER_GRB2_TAP_1_run1.RAW (F002016): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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55 04112012_JL_HCC827ER_GRB2_TAP_1_run2.RAW (F002017): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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56 04112012_JL_HCC827ER_GRB2_TAP_2_run1_120430121913.RAW (F002018): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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57 04112012_JL_HCC827ER_GRB2_TAP_2_run2.RAW (F002019): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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58 04112012_JL_HCC827ER_P85B_TAP_1_run1.RAW (F002020): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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59 04112012_JL_HCC827ER_P85B_TAP_1_run2.RAW (F002021): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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60 04112012_JL_HCC827ER_P85B_TAP_2_run1.RAW (F002022): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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61 04112012_JL_HCC827ER_P85B_TAP_2_run2.RAW (F002023): Peptide Prophet with Delta Mass Correction (No decoys found) [all charge states]
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62 Scaffold: Version: Scaffold_4.3.4
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63 Modification Metadata Set: 0 modifications
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64 Source: None
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65 Comment:
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66 Protein Grouping Strategy: Experiment-wide grouping with protein cluster analysis
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67 Peptide Thresholds: 95.0% minimum
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68 Protein Thresholds: 95.0% minimum and 2 peptides minimum
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69 Peptide FDR: 0.7% (Prophet)
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70 Protein FDR: 0.1% (Prophet)
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71 GO Annotation Source(s):
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72
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73 EGFR_TAP Displaying:Total Spectrum Count Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample Uncategorized Sample
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74 WT_EGFR1_1 WT_EGFR1_2 WT_EGFR2_1 WT_EGFR2_2 WT_ERBB31_1 WT_ERBB31_2 WT_ERBB32_1 WT_ERBB32_2 WT_GFP1_1 WT_GFP1_2 WT_GFP2_1 WT_GFP2_2 WT_GRB21_1 WT_GRB21_2 WT_GRB22_1 WT_GRB22_2 WT_P85B1_1 WT_P85B1_2 WT_P85B2_1 WT_P85B2_2 ER_EGFR1_1 ER_EGFR1_2 ER_EGFR2_1 ER_EGFR2_2 ER_ERBB31_1 ER_ERBB31_2 ER_ERBB32_1 ER_ERBB32_2 ER_GRB21_1 ER_GRB21_2 ER_GRB22_1 ER_GRB22_2 ER_P85B1_1 ER_P85B1_2 ER_P85B2_1 ER_P85B2_2
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75 # Visible? Starred? Identified Proteins (60) Accession Number Molecular Weight Protein Grouping Ambiguity Quantitative Variance Taxonomy WT_EGFR1_1 WT_EGFR1_2 WT_EGFR2_1 WT_EGFR2_2 WT_ERBB31_1 WT_ERBB31_2 WT_ERBB32_1 WT_ERBB32_2 WT_GFP1_1 WT_GFP1_2 WT_GFP2_1 WT_GFP2_2 WT_GRB21_1 WT_GRB21_2 WT_GRB22_1 WT_GRB22_2 WT_P85B1_1 WT_P85B1_2 WT_P85B2_1 WT_P85B2_2 ER_EGFR1_1 ER_EGFR1_2 ER_EGFR2_1 ER_EGFR2_2 ER_ERBB31_1 ER_ERBB31_2 ER_ERBB32_1 ER_ERBB32_2 ER_GRB21_1 ER_GRB21_2 ER_GRB22_1 ER_GRB22_2 ER_P85B1_1 ER_P85B1_2 ER_P85B2_1 ER_P85B2_2
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76 1.1 TRUE Empty Epidermal growth factor receptor OS=Homo sapiens GN=EGFR PE=1 SV=2 EGFR_HUMAN 134 kDa TRUE unknown 67 52 45 55 5 3 4 5 0 0 0 0 19 18 36 36 7 6 12 7 36 29 12 9 0 0 3 3 5 8 0 0 1 1 1 2
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77 1.2 TRUE Empty Receptor tyrosine-protein kinase erbB-2 OS=Homo sapiens GN=ERBB2 PE=1 SV=1 ERBB2_HUMAN 138 kDa TRUE unknown 4 5 3 5 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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78 2.1 TRUE Empty Phosphatidylinositol 3-kinase regulatory subunit beta OS=Homo sapiens GN=PIK3R2 PE=1 SV=2 P85B_HUMAN 82 kDa TRUE unknown 0 0 0 0 4 4 4 3 0 0 0 0 2 0 3 3 26 41 47 39 0 0 0 0 0 0 3 4 0 0 0 0 15 13 16 17
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79 2.2 TRUE Empty Phosphatidylinositol 3-kinase regulatory subunit gamma OS=Homo sapiens GN=PIK3R3 PE=1 SV=2 P55G_HUMAN 54 kDa TRUE unknown 0 0 0 0 2 2 3 3 0 0 0 0 0 0 0 0 3 4 2 3 0 0 0 0 0 0 1 1 0 0 0 0 2 2 3 2
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80 2.3 TRUE Empty Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Homo sapiens GN=PIK3R1 PE=1 SV=2 P85A_HUMAN 84 kDa TRUE unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 3 2 4 3
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81 3 TRUE Empty Keratin, type II cytoskeletal 1 OS=Homo sapiens GN=KRT1 PE=1 SV=6 K2C1_HUMAN 66 kDa TRUE unknown 3 4 6 5 8 8 6 6 10 10 7 7 10 7 13 10 16 14 9 7 17 17 1 1 5 5 6 5 6 5 0 0 5 4 10 8
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82 4.1 TRUE Empty Keratin, type I cytoskeletal 10 OS=Homo sapiens GN=KRT10 PE=1 SV=6 K1C10_HUMAN 59 kDa TRUE unknown 2 0 3 3 5 5 3 2 1 2 4 3 3 3 9 9 11 8 2 3 10 11 1 1 3 3 2 2 0 2 0 0 0 1 5 4
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83 4.2 TRUE Empty Keratin, type I cytoskeletal 16 OS=Homo sapiens GN=KRT16 PE=1 SV=4 K1C16_HUMAN 51 kDa TRUE unknown 0 0 2 1 0 1 0 0 1 1 2 2 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 1 2 0 0 1 0 3 3
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84 5 TRUE Empty Growth factor receptor-bound protein 2 OS=Homo sapiens GN=GRB2 PE=1 SV=1 GRB2_HUMAN 25 kDa unknown 2 0 2 2 0 0 0 0 0 0 0 0 9 6 10 11 0 1 1 1 1 1 0 0 0 0 0 0 7 7 0 0 0 0 0 0
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85 6 TRUE Empty 78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2 GRP78_HUMAN 72 kDa TRUE unknown 16 14 11 12 4 3 6 3 0 0 0 0 0 0 0 0 0 0 0 0 9 9 2 1 0 0 2 2 0 0 0 0 0 0 0 0
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86 7.1 TRUE Empty Keratin, type II cytoskeletal 2 epidermal OS=Homo sapiens GN=KRT2 PE=1 SV=2 K22E_HUMAN 65 kDa TRUE unknown 2 3 6 4 5 5 4 4 4 4 1 1 4 5 4 4 8 8 3 4 7 5 1 1 3 3 4 3 2 1 0 0 1 1 5 4
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87 7.2 TRUE Empty Keratin, type II cytoskeletal 8 OS=Homo sapiens GN=KRT8 PE=1 SV=7 K2C8_HUMAN 54 kDa TRUE unknown 1 1 2 2 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0
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88 7.3 TRUE Empty Keratin, type II cytoskeletal 5 OS=Homo sapiens GN=KRT5 PE=1 SV=3 K2C5_HUMAN 62 kDa TRUE unknown 1 1 3 2 3 2 2 2 1 1 2 0 2 2 2 1 0 2 0 0 3 2 0 0 0 0 1 1 0 0 0 0 0 0 2 2
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89 7.4 TRUE Empty Keratin, type II cytoskeletal 4 OS=Homo sapiens GN=KRT4 PE=1 SV=4 K2C4_HUMAN 57 kDa TRUE unknown 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 3 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
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90 7.5 TRUE Empty Keratin, type II cytoskeletal 6B OS=Homo sapiens GN=KRT6B PE=1 SV=5 K2C6B_HUMAN 60 kDa TRUE unknown 1 2 4 4 3 3 3 3 2 2 2 1 2 2 3 2 4 4 2 0 5 3 0 0 1 0 2 1 0 0 0 0 0 0 3 2
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91 7.6 TRUE Empty Keratin, type II cytoskeletal 7 OS=Homo sapiens GN=KRT7 PE=1 SV=5 K2C7_HUMAN 51 kDa TRUE unknown 0 0 0 2 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0
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92 8 TRUE Empty Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1 HSP7C_HUMAN 71 kDa TRUE unknown 15 10 12 11 5 4 6 5 0 0 1 1 2 2 1 1 1 0 0 0 10 15 2 2 0 1 1 2 1 0 0 0 1 1 0 0
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93 9 TRUE Empty Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform OS=Homo sapiens GN=PIK3CA PE=1 SV=2 PK3CA_HUMAN 124 kDa unknown 0 0 0 0 3 2 3 3 0 0 0 0 0 0 0 0 6 7 11 10 0 0 0 0 0 0 1 1 0 0 0 0 3 3 6 6
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94 10 TRUE Empty Receptor tyrosine-protein kinase erbB-3 OS=Homo sapiens GN=ERBB3 PE=1 SV=1 ERBB3_HUMAN 148 kDa unknown 0 0 0 0 4 5 7 6 0 0 0 0 0 0 0 0 2 2 4 4 0 0 0 0 1 2 2 3 0 0 0 0 1 0 2 1
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95 11.1 TRUE Empty ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=7 ADT2_HUMAN 33 kDa TRUE unknown 5 3 5 5 2 1 2 1 0 0 0 0 2 3 3 3 1 0 1 0 3 2 0 0 0 0 1 1 1 0 0 0 0 0 0 0
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bornea
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96 11.2 TRUE Empty ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 PE=1 SV=4 ADT3_HUMAN 33 kDa TRUE unknown 5 4 5 5 1 0 2 1 0 0 0 0 1 2 2 2 0 0 1 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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97 12 TRUE Empty Keratin, type I cytoskeletal 9 OS=Homo sapiens GN=KRT9 PE=1 SV=3 K1C9_HUMAN 62 kDa unknown 1 1 1 0 1 2 0 1 0 0 1 0 3 1 2 1 4 2 0 1 3 5 0 0 3 2 1 1 1 1 0 0 1 0 1 0
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bornea
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98 13.1 TRUE Empty Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A PE=1 SV=1 TBA1A_HUMAN 50 kDa TRUE unknown 5 3 5 3 1 1 2 2 0 0 0 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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bornea
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99 13.2 TRUE Empty Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1 TBA4A_HUMAN 50 kDa TRUE unknown 3 2 3 1 0 0 1 1 0 0 0 0 0 0 2 1 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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100 14 TRUE Empty Rho guanine nucleotide exchange factor 5 OS=Homo sapiens GN=ARHGEF5 PE=1 SV=3 ARHG5_HUMAN 177 kDa unknown 0 0 0 0 0 0 0 0 0 0 0 0 5 7 12 11 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0
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bornea
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101 15 TRUE Empty Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform OS=Homo sapiens GN=PIK3CB PE=1 SV=1 PK3CB_HUMAN 123 kDa TRUE unknown 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 4 2 5 4 0 0 0 0 0 0 0 0 0 0 0 0 1 1 4 2
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bornea
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102 16 TRUE Empty Insulin receptor substrate 1 OS=Homo sapiens GN=IRS1 PE=1 SV=1 IRS1_HUMAN 132 kDa unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 6 3 0 0 0 0 0 0 0 0 0 0 0 0 2 3 3 4
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bornea
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103 17.1 TRUE Empty Tubulin beta chain OS=Homo sapiens GN=TUBB PE=1 SV=2 TBB5_HUMAN 50 kDa TRUE unknown 8 6 5 2 0 1 2 1 0 0 0 0 1 1 2 1 0 0 0 0 3 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
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bornea
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104 17.2 TRUE Empty Tubulin beta-3 chain OS=Homo sapiens GN=TUBB3 PE=1 SV=2 TBB3_HUMAN 50 kDa TRUE unknown 2 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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105 18.1 TRUE Empty Heat shock 70 kDa protein 1A OS=Homo sapiens GN=HSPA1A PE=1 SV=1 HS71A_HUMAN (+1) 70 kDa TRUE unknown 5 3 5 5 0 1 1 1 0 0 0 0 0 1 1 1 0 0 0 0 2 3 1 1 0 0 1 1 0 0 0 0 0 0 0 0
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parents:
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106 19.1 TRUE Empty Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5 HS90A_HUMAN 85 kDa TRUE unknown 3 3 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
107 19.2 TRUE Empty Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4 HS90B_HUMAN 83 kDa TRUE unknown 4 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
108 20.1 TRUE Empty 14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1 1433E_HUMAN 29 kDa TRUE unknown 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1
843ee18d6065 Uploaded
bornea
parents:
diff changeset
109 20.2 TRUE Empty 14-3-3 protein theta OS=Homo sapiens GN=YWHAQ PE=1 SV=1 1433T_HUMAN 28 kDa TRUE unknown 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1
843ee18d6065 Uploaded
bornea
parents:
diff changeset
110 21 TRUE Empty Leucine-rich PPR motif-containing protein, mitochondrial OS=Homo sapiens GN=LRPPRC PE=1 SV=3 LPPRC_HUMAN 158 kDa unknown 1 3 3 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
111 22 TRUE Empty ERBB receptor feedback inhibitor 1 OS=Homo sapiens GN=ERRFI1 PE=1 SV=1 ERRFI_HUMAN 51 kDa unknown 1 2 1 1 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
112 23.1 TRUE Empty AP-2 complex subunit alpha-1 OS=Homo sapiens GN=AP2A1 PE=1 SV=3 AP2A1_HUMAN 108 kDa TRUE unknown 1 1 1 1 0 0 0 0 0 0 0 0 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
113 24 TRUE Empty Growth factor receptor-bound protein 7 OS=Homo sapiens GN=GRB7 PE=1 SV=2 GRB7_HUMAN 60 kDa unknown 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 1 1 5 3 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
114 25 TRUE Empty Signal transducer and activator of transcription 3 OS=Homo sapiens GN=STAT3 PE=1 SV=2 STAT3_HUMAN 88 kDa unknown 4 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
115 26 TRUE Empty Annexin A2 OS=Homo sapiens GN=ANXA2 PE=1 SV=2 ANXA2_HUMAN 39 kDa unknown 3 4 0 1 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
116 27 TRUE Empty Receptor-type tyrosine-protein phosphatase alpha OS=Homo sapiens GN=PTPRA PE=1 SV=2 PTPRA_HUMAN 91 kDa unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
117 28 TRUE Empty Complement component 1 Q subcomponent-binding protein, mitochondrial OS=Homo sapiens GN=C1QBP PE=1 SV=1 C1QBP_HUMAN 31 kDa unknown 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
118 29 TRUE Empty SHC-transforming protein 1 OS=Homo sapiens GN=SHC1 PE=1 SV=4 SHC1_HUMAN 63 kDa unknown 0 0 0 0 0 0 0 0 0 0 0 0 2 3 3 2 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
119 30 TRUE Empty Tyrosine-protein phosphatase non-receptor type 11 OS=Homo sapiens GN=PTPN11 PE=1 SV=2 PTN11_HUMAN 68 kDa unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
120 31 TRUE Empty Serum paraoxonase/arylesterase 2 OS=Homo sapiens GN=PON2 PE=1 SV=3 PON2_HUMAN 39 kDa unknown 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
121 32 TRUE Empty Hepatocyte growth factor receptor OS=Homo sapiens GN=MET PE=1 SV=4 MET_HUMAN 156 kDa unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 1 0 2 2 0 0 0 0 1 1
843ee18d6065 Uploaded
bornea
parents:
diff changeset
122 33 TRUE Empty Crk-like protein OS=Homo sapiens GN=CRKL PE=1 SV=1 CRKL_HUMAN 34 kDa unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
123 34 TRUE Empty E3 ubiquitin-protein ligase CBL OS=Homo sapiens GN=CBL PE=1 SV=2 CBL_HUMAN 100 kDa unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
124 35 TRUE Empty Pleckstrin homology-like domain family A member 2 OS=Homo sapiens GN=PHLDA2 PE=1 SV=2 PHLA2_HUMAN 17 kDa unknown 1 1 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
125 36 TRUE Empty 28S ribosomal protein S27, mitochondrial OS=Homo sapiens GN=MRPS27 PE=1 SV=3 RT27_HUMAN 48 kDa unknown 0 0 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
126 37 TRUE Empty Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3 M2OM_HUMAN 34 kDa unknown 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
127 38 TRUE Empty Signal transducer and activator of transcription 1-alpha/beta OS=Homo sapiens GN=STAT1 PE=1 SV=2 STAT1_HUMAN 87 kDa unknown 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
128 39 TRUE Empty SRA stem-loop-interacting RNA-binding protein, mitochondrial OS=Homo sapiens GN=SLIRP PE=1 SV=1 SLIRP_HUMAN 12 kDa unknown 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
129 40 TRUE Empty Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform OS=Homo sapiens GN=PIK3CD PE=1 SV=2 PK3CD_HUMAN 119 kDa TRUE unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
130 41 TRUE Empty Stress-70 protein, mitochondrial OS=Homo sapiens GN=HSPA9 PE=1 SV=2 GRP75_HUMAN 74 kDa unknown 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
131 42 TRUE Empty Apoptosis-inducing factor 1, mitochondrial OS=Homo sapiens GN=AIFM1 PE=1 SV=1 AIFM1_HUMAN 67 kDa unknown 0 0 0 0 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
132 43 TRUE Empty Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1 PHB_HUMAN 30 kDa unknown 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
133 44 TRUE Empty Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK PE=1 SV=1 HNRPK_HUMAN 51 kDa unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
134 45 TRUE Empty Transmembrane protein 33 OS=Homo sapiens GN=TMEM33 PE=1 SV=2 TMM33_HUMAN 28 kDa unknown 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
135 46 TRUE Empty 28S ribosomal protein S34, mitochondrial OS=Homo sapiens GN=MRPS34 PE=1 SV=2 RT34_HUMAN 26 kDa unknown 0 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
843ee18d6065 Uploaded
bornea
parents:
diff changeset
136
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bornea
parents:
diff changeset
137 END OF FILE