Mercurial > repos > bornea > saint_preprocessing

comparison SAINT_preprocessing_mq_pep.py @ 43:1341c966a016 draft

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Uploaded
author bornea
date Thu, 19 May 2016 10:43:54 -0400
parents 13969f07b129
children b95bf0251ffd
comparison
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42:13969f07b129 43:1341c966a016
262 seq = get_info(a).seqlength 262 seq = get_info(a).seqlength
263 GN = get_info(a).genename 263 GN = get_info(a).genename
264 if seq != 'NA': 264 if seq != 'NA':
265 if GN != 'NA': 265 if GN != 'NA':
266 valid_prots.append(a) 266 valid_prots.append(a)
267 print valid_prots
267 with open('inter.txt', 'w') as input_file: 268 with open('inter.txt', 'w') as input_file:
268 l = 0; a = 0 269 l = 0; a = 0
269 for bb in bait: 270 for bb in bait:
270 for lst in data: 271 for lst in data:
271 if valid_prots[a] not in errors: 272 if valid_prots[a] not in errors: