Mercurial > repos > bornea > saint_preprocessing
comparison SAINT_preprocessing_mq_pep.py @ 42:13969f07b129 draft
Uploaded
| author | bornea |
|---|---|
| date | Thu, 19 May 2016 10:41:09 -0400 |
| parents | ca0649bf68e3 |
| children | 1341c966a016 |
comparison
equal
deleted
inserted
replaced
| 41:ca0649bf68e3 | 42:13969f07b129 |
|---|---|
| 267 with open('inter.txt', 'w') as input_file: | 267 with open('inter.txt', 'w') as input_file: |
| 268 l = 0; a = 0 | 268 l = 0; a = 0 |
| 269 for bb in bait: | 269 for bb in bait: |
| 270 for lst in data: | 270 for lst in data: |
| 271 if valid_prots[a] not in errors: | 271 if valid_prots[a] not in errors: |
| 272 input_file.write(header[bait_index[l]] + '\t' + bb[1] + '\t' + valid_prots[a] + '\t' | 272 input_file.write(header[bait_index[l]] + '\t' + bb[1] + '\t' + valid_prots[a] + '\t' + lst[bait_index[l]] + '\n') |
| 273 + lst[bait_index[l]] + '\n') | |
| 274 a += 1 | 273 a += 1 |
| 275 if a == len(valid_prots): | 274 if a == len(valid_prots): |
| 276 l += 1; a = 0 | 275 l += 1; a = 0 |
| 277 | 276 |
| 278 | 277 |