Mercurial > repos > bornea > saint_preprocessing

diff SAINT_preprocessing.xml @ 64:e382e24af909 draft

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Uploaded
author bornea
date Sat, 27 Aug 2016 22:13:10 -0400
parents 1972ccdbeb16
children a51c0e6d7d99
line wrap: on
line diff
--- a/SAINT_preprocessing.xml	Sat Aug 27 22:12:01 2016 -0400
+++ b/SAINT_preprocessing.xml	Sat Aug 27 22:13:10 2016 -0400
@@ -32,7 +32,7 @@
         "
       \$INSTALL_RUN_PATH/ $type_select.bait_bool $type_select.bait_file_in $Inter_file $Prey_file
     #elif (str($type_select.type) == 'mzIdentML'):
-      Protein_report_processing.py "$type_select.input" $type_select.bait_file_in $type_select.preybool $type_select.fasta_db \$INSTALL_RUN_PATH/ 
+      mzID_process2.py "$type_select.input" $type_select.bait_file_in $type_select.preybool $type_select.fasta_db \$INSTALL_RUN_PATH/ 
         "
         #for $ba in $bait
           ${ba.bait1}