Mercurial > repos > brad-chapman > bam_to_bigwig

diff bam_to_bigwig/bam_to_bigwig.xml @ 4:14e5258d1b39

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v0.1.1: Add the forgotten --split argument in XML and moves to using the new bedtools. Thanks to David Leader
author Brad Chapman <chapmanb@50mail.com>
date Tue, 11 Feb 2014 15:55:22 -0500
parents e2edfa478eb4
children
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--- a/bam_to_bigwig/bam_to_bigwig.xml	Wed Sep 05 21:19:42 2012 -0400
+++ b/bam_to_bigwig/bam_to_bigwig.xml	Tue Feb 11 15:55:22 2014 -0500
@@ -1,6 +1,6 @@
-<tool id="bam_to_bigwig" name="BAM to BigWig" version="0.1.0">
+<tool id="bam_to_bigwig" name="BAM to BigWig" version="0.1.1">
   <description>Calculates coverage from a BAM alignment file</description>
-  <command interpreter="python">bam_to_bigwig.py $align --outfile=$out</command>
+  <command interpreter="python">bam_to_bigwig.py $align --outfile=$out --split</command>
   <inputs>
     <param format="bam" name="align" type="data" label="BAM alignment file"/>
   </inputs>