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annotate test-data/res_files/reads-sample-small.fastq/subgroups/transcripts.sam_samse.err @ 67:740884893563 draft

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planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit fa75629bca78685de0106390758c0e85f1ca0836
author brasset_jensen
date Thu, 31 Jan 2019 16:10:58 -0500
parents 11708af40030
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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11708af40030 planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit a461e07471d3897046e14389171a2c03d09b912d
pierre.pouchin
parents: 61
diff changeset
1 [bwa_aln_core] convert to sequence coordinate... 0.00 sec
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9185ca0a7b43 Updated package according to recommendations.
pierre.pouchin
parents:
diff changeset
2 [bwa_aln_core] refine gapped alignments... 0.00 sec
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11708af40030 planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit a461e07471d3897046e14389171a2c03d09b912d
pierre.pouchin
parents: 61
diff changeset
3 [bwa_aln_core] print alignments... 0.00 sec
11708af40030 planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit a461e07471d3897046e14389171a2c03d09b912d
pierre.pouchin
parents: 61
diff changeset
4 [bwa_aln_core] 3080 sequences have been processed.
61
9185ca0a7b43 Updated package according to recommendations.
pierre.pouchin
parents:
diff changeset
5 [main] Version: 0.7.12-r1039
63
11708af40030 planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit a461e07471d3897046e14389171a2c03d09b912d
pierre.pouchin
parents: 61
diff changeset
6 [main] CMD: bwa samse /data/galaxy/galaxy-server/database/jobs_directory/015/15799/dataset_35827_files/dataset_35118.dat_symlink.fa /dev/stdin /data/galaxy/galaxy-server/database/jobs_directory/015/15799/dataset_35827_files/reads-sample-small.fastq/subgroups/bonafide_reads.fastq
11708af40030 planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit a461e07471d3897046e14389171a2c03d09b912d
pierre.pouchin
parents: 61
diff changeset
7 [main] Real time: 0.034 sec; CPU: 0.016 sec