annotate tool-data/bwa_index.loc.sample @ 60:9645d995fb3c
draft
Fix for spaces in datasets names.
| author |
pierre.pouchin |
| date |
Wed, 24 Oct 2018 07:40:20 -0400 |
| parents |
4bc00caa60b4 |
| children |
9185ca0a7b43 |
| rev |
line source |
|
40
|
1 #-rw-r--r-- 1 james universe 830134 2005-09-13 10:12 phiX.fa.amb
|
|
|
2 #-rw-r--r-- 1 james universe 527388 2005-09-13 10:12 phiX.fa.ann
|
|
|
3 #-rw-r--r-- 1 james universe 269808 2005-09-13 10:12 phiX.fa.bwt
|
|
|
4 #...etc...
|
|
|
5 #
|
|
|
6 #Your bwa_index.loc file should include an entry per line for each
|
|
|
7 #index set you have stored. The "file" in the path does not actually
|
|
|
8 #exist, but it is the prefix for the actual index files. For example:
|
|
|
9 #
|
|
|
10 #phiX174 phiX phiX174 /depot/data2/galaxy/phiX/base/phiX.fa
|
|
|
11 #hg18canon hg18 hg18 Canonical /depot/data2/galaxy/hg18/base/hg18canon.fa
|
|
|
12 #hg18full hg18 hg18 Full /depot/data2/galaxy/hg18/base/hg18full.fa
|
|
|
13 #/orig/path/hg19.fa hg19 hg19 /depot/data2/galaxy/hg19/base/hg19.fa
|
|
1
|
14 #...etc... |
