Mercurial > repos > brasset_jensen > srnapipe

annotate tool_dependencies.xml @ 18:9f6ece278d09 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author brasset_jensen
date Mon, 29 Jan 2018 05:27:31 -0500
parents 18171b884c3a
children d5bd2bbd655d
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
11
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
1 <?xml version="1.0"?>
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
2 <tool_dependency>
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
3 <package name="bwa" version="0.7.12">
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
4 <repository changeset_revision="dcae4134cd62" name="package_bwa_0_7_12" owner="avowinkel" toolshed="https://toolshed.g2.bx.psu.edu" />
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
5 </package>
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
6 <package name="bedtools" version="2.24">
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
7 <repository changeset_revision="3416a1d4a582" name="package_bedtools_2_24" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
8 </package>
17
18171b884c3a Uploaded
brasset_jensen
parents: 13
diff changeset
9 <package name="samtools" version="1.3">
11
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
10 </package>
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
11 <package name="R" version="3.1.2">
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
12 <repository changeset_revision="d9f7d84125b7" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
13 </package>
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
14 <package name="Perl" version="5.18">
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
15 <repository changeset_revision="35f117d7396b" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
16 </package>
13
a4a170bc040f Uploaded
brasset_jensen
parents: 12
diff changeset
17 <package>https://depot.galaxyproject.org/software/plotrix/plotrix_3.6_src_all.tar.gz</package>
a4a170bc040f Uploaded
brasset_jensen
parents: 12
diff changeset
18 <package>https://depot.galaxyproject.org/software/bioconductor-sushi/bioconductor-sushi_1.14.0_src_all.tar.gz</package>
a4a170bc040f Uploaded
brasset_jensen
parents: 12
diff changeset
19 <package>https://depot.galaxyproject.org/software/RColorBrewer/RColorBrewer_1.1-2_src_all.tar.gz</package>
a4a170bc040f Uploaded
brasset_jensen
parents: 12
diff changeset
20 <package>https://depot.galaxyproject.org/software/ggplot2/ggplot2_1.0.1_src_all.tar.gz</package>
a4a170bc040f Uploaded
brasset_jensen
parents: 12
diff changeset
21 <package name="Perl" version="5.18" />
a4a170bc040f Uploaded
brasset_jensen
parents: 12
diff changeset
22 <package>https://depot.galaxyproject.org/software/perl-statistics-r/perl-statistics-r_0.34_src_all.tar.gz</package>
a4a170bc040f Uploaded
brasset_jensen
parents: 12
diff changeset
23 <package>https://cpan.metacpan.org/authors/id/Y/YA/YANICK/Parallel-ForkManager-1.19.tar.gz</package>
a4a170bc040f Uploaded
brasset_jensen
parents: 12
diff changeset
24 <package>https://cpan.metacpan.org/authors/id/F/FA/FANGLY/Statistics-R-0.34.tar.gz</package>
a4a170bc040f Uploaded
brasset_jensen
parents: 12
diff changeset
25 <package>https://cpan.metacpan.org/authors/id/J/JV/JV/Getopt-Long-2.50.tar.gz</package>
a4a170bc040f Uploaded
brasset_jensen
parents: 12
diff changeset
26 <package>https://cpan.metacpan.org/authors/id/S/SH/SHLOMIF/String-Random-0.29.tar.gz</package>
11
2ac343502096 Uploaded
brasset_jensen
parents:
diff changeset
27 </tool_dependency>