annotate test-data/res_files/reads-sample-small.fastq/subgroups/PPPartners/FW.html @ 69:fa794d2a5aaf draft

planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit bd03f99240a3d174c1b22245fbdf45e15edb4a5e
author brasset_jensen
date Tue, 12 Feb 2019 04:11:07 -0500
parents 9185ca0a7b43
children
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1
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2 <!DOCTYPE html>
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3 <html lang="en">
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4 <head>
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5 <meta charset="utf-8">
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6 <title>pipeline</title>
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7 <meta name="viewport" content="width=device-width, initial-scale=1.0">
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8 <meta name="description" content="">
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9 <meta name="author" content="">
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10 <!-- Le styles -->
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11 <link href="css/bootstrap.css" rel="stylesheet">
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12 <link href="css/bootstrap-table.css" rel="stylesheet">
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13 <style type="text/css">
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14 body {
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15 padding-top: 60px;
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16 padding-bottom: 40px;
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17 }
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18 div#page {
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19 width: 940px;
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20 background-color: #fff;
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21 margin: 0 auto;
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22 text-align: left;
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23 border-color: #fff;
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24 border-style: none solid solid;
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25 border-width: medium 1px 1px;
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26 }
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28 div.content {
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29 display: none;
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30 float: right;
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31 width: 550px;
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32 }
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33 div.content a, div.navigation a {
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34 text-decoration: none;
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35 color: #777;
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36 }
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37 div.content a:focus, div.content a:hover, div.content a:active {
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38 text-decoration: underline;
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39 }
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41 div.controls {
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42 margin-top: 5px;
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43 height: 23px;
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44 }
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45
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46 div.controls a {
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47 padding: 5px;
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48 }
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49 div.ss-controls {
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50 float: left;
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51 }
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52 div.nav-controls {
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53 float: right;
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54 }
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55 div.slideshow-container {
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56 position: relative;
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57 clear: both;
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58 height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
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59 }
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60 div.loader {
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61 position: absolute;
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62 top: 0;
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63 left: 0;
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64 background-image: url('loader.gif');
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65 background-repeat: no-repeat;
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66 background-position: center;
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67 width: 550px;
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68 height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
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69 }
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70 div.slideshow {
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74 div.slideshow span.image-wrapper {
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75 display: block;
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76 position: absolute;
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77 top: 0;
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78 left: 0;
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79 }
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80 div.slideshow a.advance-link {
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81 display: block;
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82 width: 550px;
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83 height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
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84 line-height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
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85 text-align: center;
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86 }
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87 div.slideshow a.advance-link:hover, div.slideshow a.advance-link:active, div.slideshow a.advance-link:visited {
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88 text-decoration: none;
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89 }
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90 div.slideshow img {
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91 vertical-align: middle;
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92 border: 1px solid #ccc;
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93 }
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95 div.image-title {
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96 font-weight: bold;
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97 font-size: 1.4em;
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98 }
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100 div.image-desc {
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101 line-height: 1.3em;
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102 padding-top: 12px;
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103 }
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104 div.navigation {
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106 }
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107 ul.thumbs {
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108 clear: both;
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109 margin: 0;
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110 padding: 0;
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111 }
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112 ul.thumbs li {
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113 float: none;
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114 padding: 0;
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115 margin: 0;
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116 list-style: none;
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117 }
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118 a.thumb {
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119 padding: 0;
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120 display: inline;
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121 border: none;
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122 }
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123 ul.thumbs li.selected a.thumb {
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124 color: #000;
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125 font-weight: bold;
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126 }
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127 a.thumb:focus {
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128 outline: none;
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129 }
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130 ul.thumbs img {
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131 border: none;
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132 display: block;
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133 }
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134 div.pagination {
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135 clear: both;
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136 }
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137 div.navigation div.top {
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138 margin-bottom: 12px;
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139 height: 11px;
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140 }
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141 div.navigation div.bottom {
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142 margin-top: 12px;
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143 }
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144 div.pagination a, div.pagination span.current, div.pagination span.ellipsis {
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145 display: block;
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146 float: left;
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147 margin-right: 2px;
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148 padding: 4px 7px 2px 7px;
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149 border: 1px solid #ccc;
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150 }
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151 div.pagination a:hover {
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152 background-color: #eee;
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153 text-decoration: none;
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154 }
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155 div.pagination span.current {
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156 font-weight: bold;
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157 background-color: #000;
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158 border-color: #000;
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159 color: #fff;
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160 }
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161 div.pagination span.ellipsis {
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162 border: none;
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163 padding: 5px 0 3px 2px;
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164 }
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165
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166 div.download {
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167 float: right;
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168 }
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169
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170 div.caption-container {
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171 position: relative;
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172 clear: left;
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173 height: 75px;
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174 }
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175 span.image-caption {
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176 display: block;
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177 position: absolute;
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178 width: 550px;
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179 top: 0;
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180 left: 0;
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181 }
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182 div.caption {
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183 padding: 12px;
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184 }
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185
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pierre.pouchin
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186 /* Featurettes
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187 ------------------------- */
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188
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189 .featurette {
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pierre.pouchin
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190 padding-top: 20px; /* Vertically center images part 1: add padding above and below text. */
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pierre.pouchin
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191 overflow: hidden; /* Vertically center images part 2: clear their floats. */
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pierre.pouchin
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192 text-align: center;
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pierre.pouchin
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193 }
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194
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pierre.pouchin
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195 .featurette-p
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pierre.pouchin
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196 {
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pierre.pouchin
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197 text-align: left;
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pierre.pouchin
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198 }
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pierre.pouchin
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199
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pierre.pouchin
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200 .featurette-image {
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pierre.pouchin
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201 margin-top: 10px; /* Vertically center images part 3: negative margin up the image the same amount of the padding to center it. */
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pierre.pouchin
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202 width: 450px;
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pierre.pouchin
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203 height: auto;
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pierre.pouchin
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204 }
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205
9185ca0a7b43 Updated package according to recommendations.
pierre.pouchin
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206 </style>
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pierre.pouchin
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207 <link href="css/bootstrap-responsive.css" rel="stylesheet">
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pierre.pouchin
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208 </head>
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pierre.pouchin
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209 <body>
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pierre.pouchin
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210
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pierre.pouchin
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211 <div align="center">
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pierre.pouchin
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212 <h2>FW</h2>
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pierre.pouchin
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213 <p> <img class="featurette-image" src="FW/histogram.png"/></p>
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pierre.pouchin
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214 <p><a href="FW/overlap_size.txt">ping pong signature</a></p>
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pierre.pouchin
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215 <p><a href="FW/sensPPP.txt">sense reads with PPP</a></p>
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pierre.pouchin
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216 <p><a href="FW/antisensPPP.txt">reverse reads with PPP</a></p>
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pierre.pouchin
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217 <p><a href="FW/sens.txt">sense reads without PPP</a></p>
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pierre.pouchin
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218 <p><a href="FW/antisens.txt">reverse reads without PPP</a></p>
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pierre.pouchin
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219 </div>
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pierre.pouchin
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220 <!-- FOOTER -->
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pierre.pouchin
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221 <div class="container">
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pierre.pouchin
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222 <footer>
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223
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pierre.pouchin
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224 </footer>
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pierre.pouchin
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225 </div>
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pierre.pouchin
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226 <!-- Le javascript
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pierre.pouchin
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227 ================================================== -->
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pierre.pouchin
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228 <!-- Placed at the end of the document so the pages load faster -->
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pierre.pouchin
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229 <script type="text/javascript" src="js/filter.js"></script>
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pierre.pouchin
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230 <script type="text/javascript" src="js/jquery.js"></script>
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pierre.pouchin
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231 <script type="text/javascript" src="js/jquery-1.3.2.js"></script>
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pierre.pouchin
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232 <script type="text/javascript" src="js/jquery.galleriffic.js"></script>
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pierre.pouchin
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233 <script type="text/javascript" src="js/jquery.opacityrollover.js"></script>
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pierre.pouchin
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234 <script type="text/javascript" src="js/bootstrap-table.js"></script>
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pierre.pouchin
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235 <script type="text/javascript" src="js/bootstrap.min.js"></script>
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pierre.pouchin
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236 <script type="text/javascript">
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pierre.pouchin
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237 jQuery(document).ready(function($) {
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pierre.pouchin
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238 // We only want these styles applied when javascript is enabled
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pierre.pouchin
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239 $('div.navigation').css({'width' : '300px', 'float' : 'left'});
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pierre.pouchin
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240 $('div.content').css('display', 'block');
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pierre.pouchin
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241
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pierre.pouchin
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242 $(".each-gallery").each(function(i){
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pierre.pouchin
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243 // Initially set opacity on thumbs and add
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pierre.pouchin
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244 // additional styling for hover effect on thumbs
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pierre.pouchin
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245 var onMouseOutOpacity = 0.67;
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pierre.pouchin
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246 $('#thumbs + i + ul.thumbs li').opacityrollover({
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pierre.pouchin
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247 mouseOutOpacity: onMouseOutOpacity,
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pierre.pouchin
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248 mouseOverOpacity: 1.0,
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pierre.pouchin
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249 fadeSpeed: 'fast',
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pierre.pouchin
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250 exemptionSelector: '.selected'
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pierre.pouchin
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251 });
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pierre.pouchin
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252
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pierre.pouchin
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253 // Initialize Advanced Galleriffic Gallery
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pierre.pouchin
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254 var gallery = $('#thumbs'+i).galleriffic({
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pierre.pouchin
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255 delay: 2500,
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pierre.pouchin
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256 numThumbs: 22,
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pierre.pouchin
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257 preloadAhead: 10,
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pierre.pouchin
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258 enableTopPager: true,
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pierre.pouchin
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259 enableBottomPager: true,
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pierre.pouchin
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260 maxPagesToShow: 7,
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pierre.pouchin
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261 imageContainerSel: '#slideshow'+ i,
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pierre.pouchin
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262 controlsContainerSel: '#controls' + i,
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pierre.pouchin
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263 captionContainerSel: '#caption' + i,
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pierre.pouchin
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264 loadingContainerSel: '#loading' + i,
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pierre.pouchin
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265 renderSSControls: true,
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pierre.pouchin
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266 renderNavControls: true,
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pierre.pouchin
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267 playLinkText: 'Play',
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pierre.pouchin
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268 pauseLinkText: 'Pause',
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pierre.pouchin
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269 prevLinkText: '&lsaquo; Previous',
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pierre.pouchin
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270 nextLinkText: 'Next &rsaquo;',
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pierre.pouchin
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271 nextPageLinkText: 'Next &rsaquo;',
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pierre.pouchin
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272 prevPageLinkText: '&lsaquo; Prev',
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pierre.pouchin
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273 enableHistory: false,
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pierre.pouchin
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274 autoStart: false,
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pierre.pouchin
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275 syncTransitions: true,
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pierre.pouchin
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276 defaultTransitionDuration: 900,
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pierre.pouchin
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277 onSlideChange: function(prevIndex, nextIndex) {
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pierre.pouchin
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278 // 'this' refers to the gallery, which is an extension of $('#thumbs')
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pierre.pouchin
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279 this.find('ul.thumbs').children()
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pierre.pouchin
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280 .eq(prevIndex).fadeTo('fast', onMouseOutOpacity).end()
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pierre.pouchin
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281 .eq(nextIndex).fadeTo('fast', 1.0);
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pierre.pouchin
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282 },
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pierre.pouchin
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283 onPageTransitionOut: function(callback) {
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pierre.pouchin
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284 this.fadeTo('fast', 0.0, callback);
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pierre.pouchin
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285 },
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pierre.pouchin
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286 onPageTransitionIn: function() {
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pierre.pouchin
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287 this.fadeTo('fast', 1.0);
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pierre.pouchin
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288 }
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pierre.pouchin
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289 });
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pierre.pouchin
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290 });
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pierre.pouchin
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291 });
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pierre.pouchin
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292 </script>
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pierre.pouchin
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293 </body>
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pierre.pouchin
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294 </html>
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295