Mercurial > repos > brasset_jensen > srnapipe

comparison test-data/res_files/reads-sample-small.fastq/subgroups/TEs.sam_samse.err @ 63:11708af40030 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit a461e07471d3897046e14389171a2c03d09b912d
author pierre.pouchin
date Thu, 24 Jan 2019 13:09:46 -0500
parents 9185ca0a7b43
children
comparison
equal deleted inserted replaced
62:e6c4f3e96e47 63:11708af40030
1 [bwa_aln_core] convert to sequence coordinate... 0.07 sec 1 [bwa_aln_core] convert to sequence coordinate... 0.01 sec
2 [bwa_aln_core] refine gapped alignments... 0.01 sec 2 [bwa_aln_core] refine gapped alignments... 0.00 sec
3 [bwa_aln_core] print alignments... 0.05 sec 3 [bwa_aln_core] print alignments... 0.01 sec
4 [bwa_aln_core] 28283 sequences have been processed. 4 [bwa_aln_core] 2853 sequences have been processed.
5 [main] Version: 0.7.12-r1039 5 [main] Version: 0.7.12-r1039
6 [main] CMD: bwa samse /data/galaxy/galaxy-server/database/jobs_directory/015/15696/dataset_35119_files/dataset_35111.dat_symlink.fa /dev/stdin /data/galaxy/galaxy-server/database/jobs_directory/015/15696/dataset_35119_files/reads-sample-small.fastq/subgroups/rejected_transcripts.fastq 6 [main] CMD: bwa samse /data/galaxy/galaxy-server/database/jobs_directory/015/15799/dataset_35827_files/dataset_35111.dat_symlink.fa /dev/stdin /data/galaxy/galaxy-server/database/jobs_directory/015/15799/dataset_35827_files/reads-sample-small.fastq/subgroups/rejected_transcripts.fastq
7 [main] Real time: 0.388 sec; CPU: 0.172 sec 7 [main] Real time: 0.074 sec; CPU: 0.024 sec