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comparison test-data/res_files/reads-sample-small.fastq/subgroups/transcripts.sam_samse.err @ 63:11708af40030 draft

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planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit a461e07471d3897046e14389171a2c03d09b912d
author pierre.pouchin
date Thu, 24 Jan 2019 13:09:46 -0500
parents 9185ca0a7b43
children
comparison
equal deleted inserted replaced
62:e6c4f3e96e47 63:11708af40030
1 [bwa_aln_core] convert to sequence coordinate... 0.01 sec 1 [bwa_aln_core] convert to sequence coordinate... 0.00 sec
2 [bwa_aln_core] refine gapped alignments... 0.00 sec 2 [bwa_aln_core] refine gapped alignments... 0.00 sec
3 [bwa_aln_core] print alignments... 0.02 sec 3 [bwa_aln_core] print alignments... 0.00 sec
4 [bwa_aln_core] 30530 sequences have been processed. 4 [bwa_aln_core] 3080 sequences have been processed.
5 [main] Version: 0.7.12-r1039 5 [main] Version: 0.7.12-r1039
6 [main] CMD: bwa samse /data/galaxy/galaxy-server/database/jobs_directory/015/15696/dataset_35119_files/dataset_35118.dat_symlink.fa /dev/stdin /data/galaxy/galaxy-server/database/jobs_directory/015/15696/dataset_35119_files/reads-sample-small.fastq/subgroups/bonafide_reads.fastq 6 [main] CMD: bwa samse /data/galaxy/galaxy-server/database/jobs_directory/015/15799/dataset_35827_files/dataset_35118.dat_symlink.fa /dev/stdin /data/galaxy/galaxy-server/database/jobs_directory/015/15799/dataset_35827_files/reads-sample-small.fastq/subgroups/bonafide_reads.fastq
7 [main] Real time: 0.225 sec; CPU: 0.080 sec 7 [main] Real time: 0.034 sec; CPU: 0.016 sec